Marinobacter sp. JH2: MARI_24450
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Entry
MARI_24450 CDS
T06162
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
marj
Marinobacter sp. JH2
Pathway
marj00300
Lysine biosynthesis
marj00470
D-Amino acid metabolism
marj01100
Metabolic pathways
marj01110
Biosynthesis of secondary metabolites
marj01120
Microbial metabolism in diverse environments
marj01230
Biosynthesis of amino acids
Module
marj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MARI_24450 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MARI_24450 (lysA)
Enzymes [BR:
marj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
MARI_24450 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
NBD_C
DUF1955
Motif
Other DBs
NCBI-ProteinID:
QBM18305
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Position
complement(2665146..2666396)
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AA seq
416 aa
AA seq
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MDYFNYRDGELYAEDLPVARIVEQFGTPAYVYSRGTLERHYRAYDDALSNRPHLVCYAVK
ANSNLAVLNVLARLGAGFDIVSAGELERVIRAGGDTSKVVFSGVGKQEWEMKRALEAGVR
CFNVESDTELDRLNAVAGELGVKAPVSLRVNPDVDAGTHPYISTGLKENKFGIDIAEAPQ
VYARAATLPNLDIKGVDCHIGSQLTTVEPFLDALDRVLALVDGLAEQGINIRHLDMGGGL
GVTYDQESPPEPSEYVTALSERMGDRELELILEPGRSIAANAGILVTKVEFLKCTEHRNF
AIIDAAMNDLIRPALYSAWQAIVPVQPHNDGEQKVWDLVGPVCETGDFLGKDRPLTLKAN
DLLAVRSAGAYGFVMASNYNTRNRPPELMVDGDQVHVVRRRETLDEQLAPESCLPE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggattattttaattatcgcgatggcgagctttacgccgaggatcttccggttgcccgg
attgtcgagcagtttggtactccggcttacgtgtattcacgggggactttggagcgacac
taccgggcctacgacgacgccctgagcaatcgccctcacttggtgtgctacgccgtaaaa
gcgaatagcaatctggccgtgctgaacgttttggccaggctcggtgccggttttgatatt
gtctcggccggtgagctggagcgagtgattcgggcaggcggcgataccagcaaggtggtg
ttctctggtgtgggcaaacaagagtgggaaatgaagcgggcgctggaagccggtgtacgc
tgctttaacgtggagtccgataccgaacttgaccggttgaatgcggtggccggtgaactg
ggcgtgaaggcgccggtttccttgcgggtgaacccggatgtggatgccggcacgcatccc
tacatttccaccgggcttaaagaaaataagttcggtattgatatcgcggaggcaccgcag
gtatatgctcgtgcagcgactttgccgaacctggatattaaaggtgtggattgccacatc
ggctcgcagctgaccactgttgaaccgtttctggacgcactggaccgggtgttggcattg
gtagatggcctggcagagcaaggcattaacattcgtcacctcgacatgggcggtggactg
ggtgtgacctacgatcaggaatcaccacctgagccgtctgagtacgtgacggctttgtct
gagcgtatgggggaccgtgaactggagcttattctggagcccggtcgctccatcgccgcg
aacgccggtattctggtgaccaaagtggaattcctcaagtgcaccgaacatcgcaacttt
gccattattgatgcggccatgaacgatctgattcgcccggcactttacagcgcctggcag
gccatcgtgccggttcagccccataacgatggtgagcagaaagtctgggatctggtaggt
ccggtttgcgaaactggcgattttcttgggaaagatcgcccgttgaccttgaaggcgaac
gacttgctggcagttcgctcagccggtgcttacggatttgtgatggcttctaactacaac
acacgcaaccgtccgcccgagttgatggtagacggtgaccaggtgcacgttgtacgccgc
cgggagacgctggacgaacagctggcgccggaaagttgcttgccggaatga
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