Marinobacter sp. JH2: MARI_25370
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Entry
MARI_25370 CDS
T06162
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase [NADP(+)]
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
marj
Marinobacter sp. JH2
Pathway
marj00250
Alanine, aspartate and glutamate metabolism
marj00310
Lysine degradation
marj00350
Tyrosine metabolism
marj00650
Butanoate metabolism
marj00760
Nicotinate and nicotinamide metabolism
marj01100
Metabolic pathways
marj01120
Microbial metabolism in diverse environments
Module
marj_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
MARI_25370 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
MARI_25370 (gabD)
00310 Lysine degradation
MARI_25370 (gabD)
00350 Tyrosine metabolism
MARI_25370 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
MARI_25370 (gabD)
Enzymes [BR:
marj01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
MARI_25370 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
MARI_25370 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
MARI_25370 (gabD)
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Motif
Pfam:
Aldedh
DUF6262
Motif
Other DBs
NCBI-ProteinID:
QBM18396
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Position
2761532..2762953
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AA seq
473 aa
AA seq
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MYINGEWLTGRSELPVTNPATGDVIGLVLDCTDQDIEAAITAADCAFKEWKKTTAYHRSQ
LLYRAWELMIRQKRELAELMTREQGKPLKASLNEVQYGADFLLWFAEEAKRVYGQSIPSG
RENQRFMVQKSPVGVVGAITPWNYPISMITRKLAPALAAGCTVILKPAESTPLCAKAMME
IFAEAGFPAGVINMLTVQDPSRVGDAFCTDPRVRKLTFTGSTPVGKKLNGLAAANMKRVS
MELGGHAPAIVFPDADPVHAAKGLSLVKFLNTGQACISPNRIFVHEDHLEPFIKELTSRA
NRLVAGNGMTEGVGIGPLINDQAIQKVDSQIKDAVAKGAKVETGGLRLMDNGLSDGYFYA
PTVLSGVTPEMKIYREETFGPVAPIITYRSEDDVIAMANDTEYGLAAYIYSNNMTTAMRA
FEALDFGIVGINDINPTSAAAPFGGMKNSGLGREGAQEGIEEYLETKLGGFAL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaacggagaatggttaaccgggcgctctgagctcccggtaaccaaccctgca
acaggtgacgtcatcgggctagtgctcgattgcacagatcaggatattgaggcggccatc
acggccgccgattgtgcttttaaagaatggaaaaaaaccacggcgtatcaccgctcccaa
ttgctctaccgggcctgggaactgatgatccggcagaagcgagaactggcagaactgatg
actcgcgaacagggaaaacccctgaaagcatcccttaacgaagttcagtacggtgcagat
ttcctactgtggtttgccgaagaggccaaacgcgtatacgggcaaagcattccttccggt
agggaaaaccagcgctttatggtacagaaatcaccggttggcgtggtcggcgcgatcacg
ccctggaactacccgatctccatgattacccgcaagcttgctcccgcattggccgccggc
tgtaccgtcatcctgaaaccagctgaaagcacacccttgtgtgcaaaggctatgatggaa
attttcgccgaagcaggcttcccagctggcgtgattaacatgctgaccgtgcaggatcca
tcccgggtgggcgatgccttttgtaccgatccgagggttcgcaagctgaccttcacaggc
tcgacgcctgtcggtaaaaaactgaacggtttggccgctgctaacatgaagcgtgtctct
atggagctcggcggccatgcgcccgccattgtcttccctgatgccgatccagtgcatgcc
gccaaaggcctgtctctggtgaaattcttgaacactggccaggcctgtatcagcccaaac
cgtattttcgtgcacgaagatcaccttgaaccgttcattaaagaactcaccagccgcgcc
aaccgtctggtggccggtaacggtatgaccgaaggcgtgggtattggcccgttgatcaac
gaccaggccatccaaaaggttgatagccagattaaagacgccgttgccaaaggcgcaaag
gtagagaccggtggcctgcgtttgatggataacggcctgtcagacggttacttctacgcc
ccaaccgtgctatccggtgtaacccctgagatgaaaatctatcgggaggaaacctttggc
ccggttgctccgatcatcacctatcgttcagaagatgatgtcatcgctatggccaacgac
accgagtatggcctagctgcctatatctacagcaacaatatgaccaccgccatgcgagcg
tttgaagctctggatttcggcattgttggcattaacgacatcaatcccaccagcgctgcc
gcgccatttggcggcatgaagaacagcggtctcggacgggaaggggctcaggaaggcatt
gaagaatatctggaaaccaaattggggggcttcgccctttaa
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