Marinobacter sp. JH2: MARI_27680
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Entry
MARI_27680 CDS
T06162
Name
(GenBank) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
marj
Marinobacter sp. JH2
Pathway
marj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MARI_27680
09124 Replication and repair
03420 Nucleotide excision repair
MARI_27680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marj03021
]
MARI_27680
03036 Chromosome and associated proteins [BR:
marj03036
]
MARI_27680
03400 DNA repair and recombination proteins [BR:
marj03400
]
MARI_27680
Enzymes [BR:
marj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
MARI_27680
Transcription machinery [BR:
marj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MARI_27680
Chromosome and associated proteins [BR:
marj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MARI_27680
DNA repair and recombination proteins [BR:
marj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MARI_27680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Motif
Other DBs
NCBI-ProteinID:
QBM18626
LinkDB
All DBs
Position
complement(3010149..3012404)
Genome browser
AA seq
751 aa
AA seq
DB search
MKVAVRTLCEFAARHGDLDFRYTPAPSAEEGIAGHQAIQDNRGYGYKSEYSLTGECLGLE
LSGRADGYNPHNGRLEEIKTHRGDVSRIRAYQRALHRAQLRVYGALLCRQEKRKKLELAL
VYFDIGKSKETSMLETASADELWQELEALCTLYKAWAEQEEHHREQRNALLTGLIFPFPD
FRPRQRQLAETVYKNAVKGETLLLEAPTGLGKTLGTLFPALMAMPAAEQDRLCYLTCRNT
ARQLALDAVDKLRSAQDPLQPWPLRTLELVSKDDACEHPDKACHGDSCPLAQGFFDRLPD
ARAEAVQSRSPLTQDVLQQIAAGHDICPYFLAQEMARWSDLVIGDVNRMFDQSALLHGLI
RQNNWKAGVLVDEAHNLVDRGRGMYSVRLDQQRLLKVKKTAPKPLKSALERTARAWQSLI
RDHGEQSQPVFLATLPSQLLGALQAMVSTITDYLTDNPPDLPLQEVLFESVAFMKLADSF
GDHSLCEFQRSGRGRASLTLQNLIPADFLRDRFAAANSVLLFSATLSPGVYYRDLLGLPE
HSRFTSLASPFSADQLQVNFTPGISTRQVHREASLQPIAEVIASQYRQRPGHYLAFFSSF
KYANEASRTLAEYARDIPQRSQQPGMSPEQRREFLAGFQKPNGSVAFAVLGGVFSEGIDL
PGDQLIGAFVATLGLPPFDAWHEILKARLQQRFGNGYDYTYLIPGLQKVAQAAGRVIRTP
EDQGVIWLIDDRFMKRSVNRLLPGWWFPDRQ
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggccgttcggaccctgtgcgagtttgcagctcgccacggtgatctggacttc
cggtacaccccggccccgagcgcagaagaaggtattgcgggccaccaagcaattcaggat
aaccgcggttacggctataaaagcgagtattcacttaccggagagtgtttggggttagag
ctatccggaagggctgatggttataatccgcacaacggacgactggaggagatcaaaacc
catcggggggatgtgtcccggattcgtgcgtatcaacgggcgctgcaccgcgcccagtta
cgggtctatggcgcgctgttatgccgccaggaaaagcgcaagaagctggagctggcgctg
gtttatttcgacatcggcaagagcaaagagacctcgatgctggaaaccgccagtgctgac
gagctgtggcaagaactcgaagccctatgcaccctttataaagcctgggcggaacaggaa
gagcatcatcgggaacagcgtaatgccctgctgacgggccttattttcccgttcccggac
tttcgcccgcgccagcggcagctggccgaaacggtgtataaaaatgccgtaaaaggcgaa
accttgctgctggaggcgcccaccggcctgggcaaaactctgggcaccctgtttccggcc
ttaatggccatgcccgcggcggaacaggaccgactgtgctacctcacctgccgaaatacc
gcccgacagttggcgctggatgctgtagataagttgcgttcagcccaggacccgctgcag
ccatggccgttacgcacgttggagttggtgtctaaagacgacgcctgcgagcacccggac
aaagcgtgtcatggcgattcctgcccgttggcgcaaggctttttcgatcgtttgccggat
gctcgggctgaagccgttcaaagcagaagtccacttactcaggatgttttgcagcaaatc
gctgcaggtcatgacatttgcccctatttcctggctcaggaaatggctcgatggagcgat
ctggtgattggcgatgtgaaccggatgtttgaccaatccgccctgctccacgggttgatt
cgccaaaacaactggaaggctggtgtgttggtggacgaagcccataatctggtggatcgt
ggccgtggtatgtactcggtgcggctggatcagcagcgtttgctgaaggtaaagaaaacc
gcgcccaaaccgctgaagtcggccttggagcgaaccgcccgggcctggcaaagtctgatc
cgcgatcacggagagcaaagccaaccggtgtttttggccaccctgccctctcagttattg
ggggcgttgcaggcaatggtgtccactatcaccgattacctcaccgataacccaccagac
ctgcccttacaggaagtactgtttgaaagtgtggcgtttatgaagctggcagacagcttc
ggggatcactctctgtgtgaattccaacgcagcggtcgggggcgtgccagcttaacgttg
cagaaccttattccagcggattttctcagagaccgctttgccgcggccaactcggtgctg
ttgttctccgcgaccctgagtcccggcgtttattaccgggatctgctgggcctgccggaa
catagccggtttacctccctggcaagcccgttcagtgcggaccagttgcaggtgaacttc
acgcccggcatcagtacccgacaggtacaccgggaagcgtcgctgcaacccatcgcggag
gtgattgccagccagtaccgacagcgtcccggtcattatctggcgttcttcagcagcttc
aaatacgccaacgaagccagcaggacgttggcagaatacgcccgggatattccgcaacgc
agtcagcaaccaggcatgagcccggagcagcgtcgggaattcttggccggattccagaag
cccaacggcagtgtggctttcgcggtattgggtggggtgttcagtgaaggcattgatctg
cctggtgatcagctcatcggtgcgtttgtcgccactttgggtctgccgccctttgacgcc
tggcacgaaattctgaaggcgcggcttcagcagcgttttggcaacggctatgactacacc
tacttgattcccggcctacaaaaggtggcccaggcggcaggccgggttatccgaacgcca
gaagaccaaggggtgatctggctgattgatgatcgtttcatgaagcgttcagtgaatcga
ttattaccgggttggtggtttcctgatcgccagtaa
DBGET
integrated database retrieval system
