Marinobacter sp. JH2: MARI_29370
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Entry
MARI_29370 CDS
T06162
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
marj
Marinobacter sp. JH2
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marj03021
]
MARI_29370 (rpoH)
Transcription machinery [BR:
marj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MARI_29370 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
KORA
UCR_14kD
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QBM18794
LinkDB
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Position
3209346..3210206
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AA seq
286 aa
AA seq
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MGTSLQLADRLVPGANLESYIQAASRIPVLTVEEERDLAERLHYDGDVEAARQLVLSHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEYGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKKLAWLNHDELNAVAEDLGVEPKVVREMEGRLASRD
ASFDGPMDDDDDAVYQAPAHYLEDRRADPAVQLENSNWSEDSNGRLMQALSVLDERSQDI
LRERWLTDSKSTLHELADKYGVSAERIRQLEKNAMKKIKAQMTEAA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgggtacgagtttacagctggctgacagactggttccgggcgcgaatctagaatcctat
attcaggcggcaagtcgcattcctgttctcacagtagaagaagagcgggatttggcggaa
cggctacattacgacggcgatgtggaggcggcccggcagttggtgctttctcaccttcgg
tttgtggttcatatcgctcgcagttattcaggctacggtctggctcaggctgatttgatt
caggaaggcaacgtaggcttgatgaaagcggtaaagcgcttcaatccagaatacggtgtg
cgcttggtatcgtttgccgtgcactggatcaaggctgagattcacgagttcattttgcgc
aactggcgtatcgtgaaagtggcgacgactaaggcacagcgtaagttgttctttaacttg
cgcagccaaaagaagaagctggcgtggttgaatcacgatgagctgaatgcggtcgcggaa
gatttgggtgtggagcccaaggtggttcgtgagatggaaggccgcttggcctcccgtgat
gcgtcgtttgatggtccaatggacgacgatgacgatgccgtttaccaggcaccggcccat
tatcttgaggatcgtcgtgcagatccggccgtgcagcttgagaattctaactggtctgaa
gattccaatggccgcttgatgcaggcgttgagtgtgctggatgagcgcagtcaggatatc
ctgcgtgagcgttggttgacggacagtaagtcgacgctgcatgagctggcggataaatat
ggcgtttctgcggagcggattcggcagttggaaaaaaacgccatgaagaagattaaggct
cagatgacggaagcggcctga
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