Marinobacter sp. JH2: MARI_30180
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Entry
MARI_30180 CDS
T06162
Symbol
uvrD_2
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
marj
Marinobacter sp. JH2
Pathway
marj03420
Nucleotide excision repair
marj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MARI_30180 (uvrD_2)
03430 Mismatch repair
MARI_30180 (uvrD_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marj03400
]
MARI_30180 (uvrD_2)
Enzymes [BR:
marj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MARI_30180 (uvrD_2)
DNA repair and recombination proteins [BR:
marj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MARI_30180 (uvrD_2)
MMR (mismatch excision repair)
Other MMR factors
MARI_30180 (uvrD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QBM18875
LinkDB
All DBs
Position
3302650..3304815
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSHIIDPLNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRMAWLMTVDRVPPTGILAV
TFTNKAAKEMRSRIEQMMNIPARGLWFGTFHGIAHRLLRSHWKDAGLPENFQVLDSDDQL
RLIKRVMREFQIDESQWPPKQAQWFINSQKDEGLRADHIQENPGDHFTNTMLKIYRQYEK
LCHQGGLVDFGELLLRSHELWLHRPELLAHYQERFQHILVDEFQDTNTIQYAWLQVLASN
RVPLTVVGDDDQSIYGWRGAKIENIQQYQRDFPNARMVRLEQNYRSTQMILKAANAVIAN
NQGRLGKELWTDGPDGDPISLYAAFNEQDEANYIADSITDWVNQGNLRSEAAILYRSNAQ
SRVLEESLMRQGIPYRVYGGLRFYDRQEIRNALAYLRLVQYHRDDAAFERVVNIPTRGIG
AKSLSEIRSYATEQGISLWESSERMLAAGQVKGRAKTGLQSFLDIINGLSEMLGEASLQG
LMKQAIENSGLKDYHASEKGEKGQARVENLEELVNALSDFEVEDGVDPLAEFLAQAALDA
GESQAEDHEDSVQLMTLHSAKGLEFPMVFLAGVEEGLFPHSMSLEEPGRMEEERRLAYVG
ITRAMKKLVLTYAESRRLYGQEKFHALSRFVREVPADCLQEVRLRNTVTRPAMVGRPNES
MFAQDSAKQSGFSLGQRVRHPKFGEGIVMNSEGTGHHTRVQVNFDEGAKWLVLAYAPLEA
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcccacatcattgaccccctgaacgatgcccaacgcgaggctgttacagct
caaaatgaccacctgttggtgctggccggtgcaggcagtggcaaaactcgggtgctggtt
caccgaatggcgtggttgatgactgtagaccgggtgccacctacaggcattctggcggtg
accttcaccaacaaagccgctaaggaaatgcgttcgcgcatcgagcaaatgatgaacatt
cccgctcgtggcctgtggttcggcaccttccacggtattgctcaccgcctgttgcgttcc
cattggaaagacgccggtctgccggaaaatttccaggtgctggacagtgacgatcagctg
cgcctgatcaaacgggtgatgcgggagttccagattgatgaaagccagtggccacccaaa
caggcccagtggttcatcaacagccagaaagacgaaggtttgcgggctgaccacattcag
gaaaacccgggcgatcacttcaccaataccatgctgaaaatctaccgccagtacgaaaaa
ctgtgccatcagggcggtttggtcgattttggcgaattgctgttgcgctcccacgagctt
tggttgcaccggcctgagctgctggcccattaccaggaacgcttccagcacattttggtg
gacgagttccaggacaccaacaccatccaatacgcctggctgcaggtgctggccagcaac
cgggtaccactgaccgtggtgggtgatgatgaccagtcgatctatggctggcgcggcgct
aagatcgagaacattcagcagtaccagcgagactttcctaacgctcggatggtgcggttg
gagcaaaattaccgttcgacacagatgattctgaaggccgcaaacgcggtgattgcaaat
aaccagggccggctgggcaaagagctttggaccgatggccctgatggcgatcccattagt
ttgtatgcggcgtttaacgaacaggacgaagctaactacatcgctgactccatcaccgac
tgggtgaatcagggtaatttgcgtagcgaagcggccatactctaccgctctaacgcccag
tcacgggtgttggaagaatctctgatgcgccagggtattccgtatcgggtgtatggcggt
ttgcgtttctacgaccgtcaggaaattcgtaacgcactggcgtacctgcgtttggttcag
tatcaccgggacgatgcggcgtttgaacgagtggtgaatattcccacccgcggcattggt
gcgaagagcctctcagagattcggtcctacgcgacggagcagggcatttctttgtgggaa
tcctccgagcgtatgctggcggcaggtcaggtaaaaggccgcgccaaaaccggcttgcag
tcattcttggacatcattaacggcttgtctgaaatgttaggcgaggcttcgttgcagggc
ttgatgaaacaagccattgaaaacagtggattgaaggactaccacgccagtgagaaaggt
gaaaaaggccaggcgcgggtggaaaacctggaggaattggtcaacgccttgtctgatttt
gaagtggaagacggggtagatccgcttgcggagttccttgctcaagccgcgttggatgcc
ggagagtcccaagctgaggatcatgaagacagcgtgcagttgatgaccttgcactcggcc
aagggcctggagttccccatggtgtttctggcgggtgttgaggaaggtttgttcccccat
agcatgtctcttgaagagccggggcggatggaggaagagcgccggttggcttatgtcggc
atcactcgggcgatgaagaagctggtgcttacttacgcggaatcccgccgtttatacggt
caggaaaagttccacgcgctgtctcgttttgttcgtgaggttccagcggattgcctgcag
gaagttcggctacgcaatacggtgactcgcccggcgatggtagggcggcctaatgaaagt
atgtttgcgcaggattcagccaagcaatcgggttttagtcttgggcagcgggtgcgtcat
ccgaagttcggcgagggtattgtgatgaattccgagggcacggggcatcatacgcgagtt
caggtgaactttgatgaaggggccaagtggcttgttcttgcgtatgcgcctttggaggcc
tgctag
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