Marinobacter sp. JH2: MARI_31430
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Entry
MARI_31430 CDS
T06162
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
marj
Marinobacter sp. JH2
Pathway
marj03030
DNA replication
marj03430
Mismatch repair
marj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MARI_31430 (polC)
03430 Mismatch repair
MARI_31430 (polC)
03440 Homologous recombination
MARI_31430 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marj03032
]
MARI_31430 (polC)
03400 DNA repair and recombination proteins [BR:
marj03400
]
MARI_31430 (polC)
Enzymes [BR:
marj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MARI_31430 (polC)
DNA replication proteins [BR:
marj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MARI_31430 (polC)
DNA repair and recombination proteins [BR:
marj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MARI_31430 (polC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
GIY-YIG_UvrC
UvrC_M
Cho_C
GIY-YIG
RNase_H_2
GIY_YIG_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QBM19000
LinkDB
All DBs
Position
complement(3430470..3431927)
Genome browser
AA seq
485 aa
AA seq
DB search
MTTSYLEQTTFAFLDIETTGGNSSHDRITEIGIRFWRAGEVVDEWQTLLNPGMRISPFIE
QLTGISNAMVADASSFETIADTLEEKLRDTVFVAHNARFDYGFIKSEYRRLRRLFSARVL
CTVKLSRHLYPEFRRHNMDTLIERHGLAEVQRHRAMGDVSAMLEFFTHARADKGDAELEA
AIGTLLQRPSIPSHLPPDTLTDLPRGPGVYRFYGENDVLLYVGKSTNIAQRVASHFSGDH
NTSKGVRISESLRRIDYTETAGELGALLLELRQIKTLNPLFNRRSRAAKNLVSIELAPNE
SGYLQAQLVREIEPHRLARYFGLFRSKRDAERALTGIAAKNELCNQLLGLEPERDGPCFQ
RVLGRCKGACEGIDDVTRYNLRVQIAFHQLRLQTWPWKGPVAIVEHRSDGAQPDILVIYN
WIHVTTVHDEQELYDLSLSGQSVTFDLDSYKLLVKALMGIGPNNHSLIELPAVGAPDVLM
ATTRG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccagctacctcgaacaaaccacatttgcgtttctcgatattgaaaccaccggc
ggaaactcgtcccacgaccggattacggaaataggaatccgcttctggcgcgcgggagaa
gttgtggatgagtggcaaaccttgctgaaccccggcatgcgcatctcaccgtttatcgag
caactgacgggcatctccaacgccatggtcgccgatgcatcgtcgtttgaaaccatcgcg
gatacgctcgaagagaaactaagggataccgtatttgttgctcacaacgcacgcttcgac
tacggattcatcaaatcggaataccgccggctcaggcggctgttttcggcacgggtactt
tgcaccgttaagctgtcccggcacctgtatccggaatttcgcaggcacaacatggacacg
ttgatcgaacgccatggcttggccgaggtacaacggcatcgggccatgggcgatgtgtcg
gctatgctggagtttttcacccacgcgcgcgctgacaaaggcgacgccgaactggaagcg
gccattggcaccctgctgcaacggccgagcattccctcacacctgccgccggacaccctg
actgatttgccacggggcccgggtgtttatcggttttacggtgaaaacgacgtgctcttg
tatgtgggcaagagcaccaacattgcccagcgtgtggcctcgcatttctccggtgatcac
aacaccagcaaaggcgtgcgcatttctgaaagtttgcgcaggatcgactacaccgaaacc
gccggcgaactcggagccctgttgctggagcttcgacagatcaaaacgctgaatccgctt
ttcaatcgccgatcccgcgcggcgaaaaatctggtgagtatcgaactggcaccgaacgag
tccggttacctgcaggcacagctggttcgggagatagagccacatcgccttgcccgttat
ttcggactgtttcgcagcaagcgcgatgccgagcgcgcgttgaccggcattgccgccaaa
aacgaactgtgcaatcaactgctaggactagagccggaacgcgatggcccctgtttccaa
cgtgtgctggggcgttgcaaaggagcctgcgaaggcattgacgacgtaactcgttataat
ctgagagtgcagattgcgtttcaccaactacgtttgcaaacctggccgtggaaaggcccg
gtcgcgattgtggagcatcgaagtgatggggcgcagcctgacattctggtgatctacaac
tggattcacgtgaccacagtgcacgacgaacaagagctttatgatctctccctgtcaggc
cagtcggtcacctttgatctggactcttacaagttactggttaaagcgctgatgggcatc
gggccaaacaaccattccctgatcgaactgccggccgtgggtgcgcccgatgtgctcatg
gcaaccactcgcggctag
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