Marinobacter sp. JH2: MARI_33260
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Entry
MARI_33260 CDS
T06162
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
marj
Marinobacter sp. JH2
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
marj03016
]
MARI_33260 (truB)
Enzymes [BR:
marj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MARI_33260 (truB)
Transfer RNA biogenesis [BR:
marj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MARI_33260 (truB)
Prokaryotic type
MARI_33260 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QBM19181
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All DBs
Position
3621279..3622202
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AA seq
307 aa
AA seq
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MSRRRKGRDVNGILVIDKPQGVTSNGILQQVKRLYGAAKAGHTGALDPLATGVLPLCFGE
ATKFSQTMLDSDKAYVTTARLGVRTETGDSEGAVVEEKPVPSLTETEVEAVLENFRGDIQ
QVPSMYSALKHQGKPLYEYAREGIEIERPARPVTIYEMKLLAVRDNELDLAVTCTKGTYI
RSLVEDIGQELGCGAHVVALRRTLAAGYTLENVQNVETLEAMRERDESLDGLLLPPESAL
TMFPEHRLSGSALVSILNGQPVRIPGQPFEGFVRVYGNHSFVGLAEAQPEGEDTVLVPRR
LVKNNGR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcgaagacgtaaaggtcgtgacgtaaatggcatcctggttattgataaaccccag
ggtgtcacctccaacggtattcttcagcaggtgaagcgcctgtatggggccgcgaaagcg
ggccataccggtgctcttgatccgttagccactggtgtgttgcctttgtgcttcggcgag
gctaccaagttttctcagacgatgttggacagcgataaagcctatgtcactacggctcgc
ttaggtgttcgcactgaaactggggattccgaaggcgctgttgttgaagaaaaaccggtt
ccctctttaacggaaaccgaggtagaagcggttctggaaaacttccggggcgacattcag
caggttccgtcgatgtattccgctctaaagcatcagggcaagcctctgtatgaatacgct
cgggaaggcattgaaatcgaacgcccggcaaggcccgttaccatctatgaaatgaagctt
cttgcggttcgggacaacgaactcgatctggcggtaacctgcactaagggtacgtacatc
cgctcattagttgaggacatcggccaagagttaggttgtggcgctcatgtggtggcttta
cgtcgtactttggctgcgggttacacgcttgaaaacgttcagaatgtcgaaactctggaa
gctatgcgcgagcgtgacgaaagcctcgacgggttgttgttgccgccggaaagcgcgctg
actatgttcccggaacaccggctttcgggatcggcgttggtgtcgatattgaacgggcaa
ccagttagaatacccggtcagccctttgaaggatttgtgcgtgtttacggcaatcattct
tttgtcgggttggctgaagctcaaccggaaggcgaagacaccgtgctggtgcctcgtcga
ctggtcaagaacaacggcagataa
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