Marinobacter sp. JH2: MARI_33280
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Entry
MARI_33280 CDS
T06162
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
marj
Marinobacter sp. JH2
Pathway
marj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MARI_33280 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marj03019
]
MARI_33280 (pnp)
03016 Transfer RNA biogenesis [BR:
marj03016
]
MARI_33280 (pnp)
Enzymes [BR:
marj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MARI_33280 (pnp)
Messenger RNA biogenesis [BR:
marj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MARI_33280 (pnp)
Transfer RNA biogenesis [BR:
marj03016
]
Prokaryotic type
tRNA degradation factors
MARI_33280 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
S1_2
OB_RRP5_4th
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QBM19183
LinkDB
All DBs
Position
3622893..3625013
Genome browser
AA seq
706 aa
AA seq
DB search
MDLQPRTKTFEMGGHTFTLETGRVARQATGSVVVTCGDTSVLGTVVGVREAKPGQPFFPL
TVNYSEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPTGYMNEVQVILTVMS
TDKKQDPDIAAMLAASAALAISGIPFDGPIGAARVGFTNDKGYFLNPSFEDLQTSLLDMV
VAGTDEAVLMVESEAKGLSEDQMLGGVLYAHQEMQTAINAIKEFAAENGKPRWDWQPEPE
DTGLLDAIKADFVGQIEEAYAIRDKMARYARLGEIKAAAVEKLAGEEGGQPSADLVKKYF
GKVEKTVVRQQVIDGKPRIDGRDNKTVRPIEVEVGILPSVHGSALFTRGETQAIVTTTLG
TTRDVQTIDALEGERKDPFMFHYNFPPYSVGEAGRVGTPGRREVGHGRLAKRGVLAVMPT
IEEFPYAIRSVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLVKEGEKFAV
LTDILGDEDHLGDMDFKVAGTKEGITALQMDIKINGITDEIMELALEQAQAARLHILDEM
NKVISEPRTELSDRAPSITTIKIHPDKIRDVIGKGGATIRSICDETGASIDLDDDGNVKI
YAENGEAAQAAMNRVKEITAEIEVGAIYKGRVERIVDFGAFVNILPGKDGLVHISQISER
RIENVTDELSEGQEVLVKVLDVDNRGRVKLSMKEVKEGEQATEFAD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtggatctgcaaccacgtacgaaaacatttgaaatgggtggacacaccttcacactggaa
accggtcgcgttgcccgtcaggcaaccggttctgttgtagttacctgtggtgatacgtcc
gttctgggtaccgttgttggtgtccgtgaagcaaagccgggccagccttttttcccgctg
accgttaactactccgagaagacttatgctgcgggtaaaatccccggtggtttcttcaag
cgtgaaggtcgtccttccgagaaagaaactctgacgtcgcgcttgatcgaccgtccgatt
cgtcctctgttcccgacgggttacatgaacgaagttcaggtgattctgacggtcatgtcg
accgacaagaagcaggatccggatatcgcagccatgctggccgcttctgctgccctggca
atctctggtattccttttgacggccctatcggtgccgctcgtgttggtttcaccaacgat
aaaggttacttcctgaacccttcttttgaagacctgcaaacctctcttctggatatggtt
gttgccggtactgatgaagccgttctgatggttgaatctgaagccaaaggcctgtctgaa
gatcagatgctgggtggcgttctgtatgctcaccaggaaatgcaaactgcaatcaacgcg
attaaagaattcgctgccgagaacggcaagccgcgttgggattggcagccagagccggaa
gacaccggactgctagacgcgatcaaagccgattttgtgggtcagatcgaagaagcttat
gccattcgcgacaagatggctcgttacgcgcgtttgggtgaaatcaaagccgctgccgtt
gagaaactggccggcgaagaaggaggtcagccttctgccgacttggtgaagaagtacttc
ggcaaagttgagaagacagttgttcgtcagcaagttatcgacggcaagccgcgtatcgat
ggccgtgacaacaagaccgttcgtccgatcgaagtggaagtaggcattctgccttctgtt
catggttctgccctgttcacccgtggtgaaactcaggcgatcgtgaccacaactctgggt
acgacccgtgacgttcagaccatcgacgcactggaaggtgagcgtaaagatccgttcatg
ttccactacaacttccctccgtactctgtcggtgaagccggccgtgtaggtactccgggt
cgtcgtgaagtgggccacggtcgtttggccaagcgtggtgtgttggcggttatgccgact
atcgaagaattcccgtacgctatccgttcggtttccgagattacggaatctaacggttcc
agctcaatggcttccgtgtgtggttcaagcctcgcgctgatggacgctggtgttccgatc
aaggcgccggttgccggtatcgcgatggggctggtcaaggaaggcgagaagtttgcggtt
ctgaccgacattctgggtgacgaagatcacttgggcgatatggacttcaaggttgcgggt
accaaagaaggtatcactgcgctgcagatggatatcaagatcaacggtatcactgacgag
atcatggaacttgctcttgagcaggcacaggctgcacgtttgcacatcctggacgagatg
aacaaggttatctctgagccgcgtaccgagctgtctgatcgtgctccgagcatcactacg
atcaagattcatccggacaagatccgtgatgtaatcggtaagggtggcgcgactattcgt
tctatctgtgatgagaccggtgcgtctatcgatctggatgacgatggtaacgtgaagatc
tacgcagaaaacggtgaagcggctcaggcggcgatgaatcgtgttaaggaaatcacggct
gagatcgaagtgggcgctatctacaagggccgtgttgagcggattgtggacttcggtgcg
tttgtgaacattctgcctggcaaggatggtctggtgcacatttcccagatctctgagcgc
cgtatcgagaacgtgactgatgagctgagcgaaggtcaggaagttctggttaaggttctg
gatgtggacaaccgtggccgcgttaagctgtccatgaaggaagttaaggaaggcgagcag
gcaactgaattcgctgactaa
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