Microbacterium arborescens: QUC20_00930
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Entry
QUC20_00930 CDS
T09423
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mark
Microbacterium arborescens
Brite
KEGG Orthology (KO) [BR:
mark00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mark03032
]
QUC20_00930
03400 DNA repair and recombination proteins [BR:
mark03400
]
QUC20_00930
Enzymes [BR:
mark01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QUC20_00930
DNA replication proteins [BR:
mark03032
]
Prokaryotic type
DNA Topoisomerases
QUC20_00930
DNA repair and recombination proteins [BR:
mark03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QUC20_00930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Med14
Motif
Other DBs
NCBI-ProteinID:
WJM15906
LinkDB
All DBs
Position
186093..187055
Genome browser
AA seq
320 aa
AA seq
DB search
MARLVRVRPDVDAGIRRIRAGKGFRYTDAAGAAIGRRDLARIRTIVIPPAWQDVWICADP
QGHIQVVGTDDAGRRQYIYHPDWTRSRDKGKYARALQLAESLPRARSRATASLRRSDLDR
ERVLAAAFRLLDRSALRIGSQRYLLQHGSRGLTTLRRRDASVADAVVSLAFSGKSGQRQA
LEIPDPDLATAIMLLIEGRPSSPLLAWQRQRRRVPLTPNDVNAYVRALTGGPFTAKDFRT
LRGTVVAAEALARMGIAETARAVHQAEVEAVRAAATALGNTPAVARSSYIDPRVFERYRS
GMLLDTTVSPESAIRSLVLG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcggctcgtccgggtccggcccgacgtcgatgccggcatccgccgcatccgcgcg
ggcaaggggttccgatacacggatgccgcgggcgcggccatcggccggcgcgacctcgcc
cgcatccggacgatcgtcatcccgccggcctggcaggacgtgtggatctgcgcggatccg
cagggccacatccaggtcgtcggcaccgacgacgcgggacgccgtcagtacatctaccac
ccggactggacacgcagccgcgacaagggcaagtacgctcgagcgctccagctcgcggag
tcgctgccgcgcgcccggtcgcgggcgaccgcgtcgttgcggcggtccgacctcgaccgc
gagcgcgtcctggcggcggcgttccgactgctcgaccgctcggcgcttcggatcgggtcg
cagcgctacctccttcagcacggcagccgcggactgacgacgcttcgacgtcgcgacgct
tcggtggccgacgccgtcgtcagcctggccttctcgggcaagagcgggcagcggcaggcg
ctcgagatccccgaccccgatctcgccacggcgatcatgctcctgatcgaggggcggccg
tcgtcgccgctgctggcatggcagcggcagcggcggcgggtgccgctcaccccgaacgac
gtcaacgcgtatgtgcgtgcgctgacgggcggtcctttcaccgcgaaggacttccgcacc
ctccgcggcaccgtcgtcgcggcggaggctctcgctcgcatgggcatcgccgagaccgct
cgcgctgtccatcaggctgaagtcgaagcggtgcgcgccgccgcgacggcgctggggaac
actcccgctgttgcccgcagctcgtacatcgacccccgcgtgttcgagcgctaccggtcg
gggatgctgctcgacacgacggtctcgcccgagtccgccatccgttcgctcgtcctcggc
tga
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