Microbacterium arborescens: QUC20_02390
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Entry
QUC20_02390 CDS
T09423
Name
(GenBank) family 78 glycoside hydrolase catalytic domain
KO
K05989
alpha-L-rhamnosidase [EC:
3.2.1.40
]
Organism
mark
Microbacterium arborescens
Pathway
mark00946
Degradation of flavonoids
mark01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mark00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
QUC20_02390
Enzymes [BR:
mark01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.40 alpha-L-rhamnosidase
QUC20_02390
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_rhamnosid6H
Bac_rhamnosid_N
Bac_rhamnosid
Bac_rhamnosid_C
Motif
Other DBs
NCBI-ProteinID:
WJM16186
LinkDB
All DBs
Position
complement(507448..510225)
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AA seq
925 aa
AA seq
DB search
MSAAVATLRAELRDDTAFVATPTPRLSWTVGTDEPDWMQRRAEIDDGSGPVALEYDESAL
VPWPFTPLAPGETRRVRIRVEGMSGTATPWSDDLVVTAGFLGDDEWVAEPIGLADPERPA
QPAVVRTRFRPARPVSRAILFWTALGSAEPEINGSAVSDEVLAPGWTAYRDRLVHETVDV
TALIRDGDNELSATLAGAWYTEKYGFFAFADRLYGDQPSFLAQLRVTYDDGTSETLAATG
AGWEAAGDGPVVDSGIYAGEHQDLARAATEFSPARVGAAARPDYENVPTPEARIAPPVRR
TQTLPVAEVLTAPSGGRILDFGQNLVGRLRLRVRGRAGQRVVVRHAEVLEHGELALRPLR
NAAATATFDLTGDDDVLESRFTFYGFRYAEVTGADVDPADIEAVVLHTDMTRTGWFSSSD
PLIDRLHENVVWGMRGNFLSIPTDCPQRDERLGWTGDLQVFAPTASFLYDCAGFLTSWLR
DLAHEQRRSGGSVPVVVPAALTAFGAFGVSPAAWGDAATVVPTVMHERFGDRDVVAAQYP
SMRSWVDAVAADAGESGLWAGRMQLGDWLDPSAPPDKPGQAKVDSDIVASAYFARSLRLV
ADAARLLGFDADAAHYGALAERSRAAFVAEYVTPAGRMVSDAPTAYALALEFDLVVDHEA
RAALATRLADLVREGGYRIGTGFVGTPLVADALTEGGRLDAAERLLTQTQCPSWLYPVTQ
GATTVWERWDSLLPDGSVNPGEMTSFNHYALGAVADWLHRTVAGLAPAAPGYRRLRIAPR
PLRSLDHAAARHLTPYGEASVAWRRAGGEIVVTATVPPSTRADVDLPGLRAEVGSGTHEW
RFAAESPTALPPLDGLSASLADVIDDPRAYDALLGALDQHAPDRVPAVRDETRWGSGRTV
SSVLMFSPPDLLTAVDSAIRDATAS
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgccgtcgcgacgctgcgcgccgaactgcgcgacgacacggcgttcgtcgca
acgcccaccccgcgactgagctggacggtcggaacggacgagcccgattggatgcagcgc
cgggccgagatcgacgacggctcgggcccggtcgccctcgagtacgacgagagcgcgctc
gtgccgtggccgttcaccccgctcgccccgggcgagacgcgacgcgtgcgcatccgggtc
gaaggcatgtcgggcacggcgacgccctggagcgatgacctcgtcgtcaccgcgggcttc
ctcggcgacgacgaatgggtcgccgagccgatcgggctcgccgacccggagcgcccggcg
cagcccgccgtcgtccgtacgaggttccggccggcccgcccggtctcgcgcgcgatcctc
ttctggacggcgctcggatcggctgagcccgagatcaacggcagcgccgtctcggacgag
gtgctcgcgccgggatggaccgcctaccgcgatcgcctggtgcacgagaccgtcgatgtc
acggccctgatccgcgacggtgacaacgagctctccgcgacgctcgcgggcgcctggtac
accgagaagtacgggttcttcgcgttcgccgaccgcctctacggcgaccagccgtcgttc
ctcgcacagctgcgggtgacctacgacgacggcacgagcgagaccctcgccgcgaccggt
gcaggatgggaggcggcgggcgacggcccggtcgtcgactccggcatctacgccggcgag
caccaggacctcgcacgcgccgcgacggagttctcgccggcgagggtcggcgccgcggcc
cgccccgattacgagaacgtcccgacgcccgaggctcgcatcgcaccgccggtgcgccgc
acccagacgctcccggtggccgaggtgctcaccgcaccttcgggcggccgcatcctcgac
ttcggccagaatctcgtcggccggctccgcctgcgcgtgcgcggccgggccgggcagcgc
gtcgtcgtccgccacgccgaagtactcgagcacggcgagctcgccctgcggccgctgcgc
aacgccgccgcgaccgcgacgttcgacctcaccggcgacgacgatgtgctcgagtcgcgc
ttcaccttctacggattccgctacgcagaggtcaccggcgccgacgtcgacccggccgac
atcgaggccgtcgtcctgcacaccgacatgacgcgcaccgggtggttctcctcgtcggac
ccgctgatcgaccgactgcacgagaacgtcgtgtgggggatgcgcggcaacttcctctcg
ataccgaccgactgtccgcagcgcgacgagcgcctgggctggaccggcgatctgcaggtc
ttcgcgccgacggcatccttcctctacgactgcgccggattcctgacgtcgtggctgcgc
gacctcgcccacgagcagcgccgcagcggcggctcggtccccgtcgtcgtccccgccgct
ctcacggccttcggggcgttcggggtgagcccggcggcctggggggatgccgcgacggtg
gtgcccaccgtgatgcacgagcgcttcggcgaccgcgacgtcgtcgccgcgcagtacccg
agcatgcgctcgtgggtcgacgcggtggcagcggatgcgggcgagagcgggctgtgggcc
ggacgcatgcagctgggcgactggctcgacccttccgctccccccgacaagccgggccag
gcgaaggtcgactccgacatcgtcgcgagcgcctacttcgcccggtcgctgcggctggtc
gccgacgcggcccgcctgctcgggttcgacgcggatgccgcgcattacggggcgctcgcg
gagcgcagccgcgcggccttcgtcgcggagtacgtcaccccggccggccggatggtcagc
gacgccccgaccgcatacgcgctcgcactcgagttcgacctcgtcgtcgaccatgaggcg
cgggcggcacttgcgacccgactggccgacctcgtccgcgaaggcggctaccgcatcggc
accggattcgtgggcacaccgctggtcgccgacgccctcaccgagggtgggcggttggat
gccgccgagcgcctgctgacgcagacgcagtgcccgtcatggctgtacccggtcacgcag
ggcgcgacgaccgtctgggaacgctgggactcgctgctgcccgacggcagtgtcaacccg
ggcgagatgacctcgttcaaccactacgcgctcggcgccgtcgccgactggctgcaccgg
accgtcgcaggcctggccccggcggcccccggttaccggcggctgcggatcgcgccgcgc
ccgctgcgttcgctcgaccacgccgcggcgcgacacctcacgccgtacggcgaggcgagc
gtggcgtggcgccgcgcgggcggagagatcgtggtcaccgcgaccgtgccgccgagcacc
cgcgccgacgtcgacctgccggggctgcgcgccgaagtcggatcggggacacacgagtgg
cgattcgcagccgagagcccgacggcgctccccccgctcgacgggctgagcgcctcgctc
gccgacgtcatcgacgacccacgggcgtacgacgctctgctcggcgcgctggaccagcac
gcccccgaccgggtgccggccgtgcgcgacgagacccgctggggttcgggccgcacggtg
agctcggtgctcatgttcagcccgcccgacctcctcacggcggtcgactccgcgatccgc
gacgccaccgcgtcctga
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