Microbacterium arborescens: QUC20_05015
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Entry
QUC20_05015 CDS
T09423
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mark
Microbacterium arborescens
Pathway
mark00300
Lysine biosynthesis
mark00470
D-Amino acid metabolism
mark01100
Metabolic pathways
mark01110
Biosynthesis of secondary metabolites
mark01120
Microbial metabolism in diverse environments
mark01230
Biosynthesis of amino acids
Module
mark_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mark00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QUC20_05015 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QUC20_05015 (dapF)
Enzymes [BR:
mark01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QUC20_05015 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WJM16677
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Position
1070963..1071832
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AA seq
289 aa
AA seq
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MATLAFTKGHGTGNDFVILADPDGELELSDAQVAALCDRHVGIGADGLLRVVRSAAIAEG
ADAAASGAAWFMDYRNADGSLAEMCGNGTRVFARYLADAGLASIEAGLRIGTRAGVKTIT
RAENGFEVDLGLWRAEEGDILVRARGLGVARPGQAIDVGNPHVVVALAGEAELDGLDLTS
QPTLDPHPAAGANVEFVVPAEPLVQNGVGAIRMRVYERGVGETLSCGTGVAASALAVRFW
AGSAAPDRWTVDVPGGTLGVRVVRQDDGEHVLLSGPATLVFSGQVTLAD
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctcgcgttcaccaagggccacggcaccggcaacgatttcgtgatcctggcc
gaccccgacggcgagctcgagctcagcgatgcgcaggtcgcggcactgtgcgaccgccac
gtcggcatcggcgccgacggcctgctgcgggtcgtccgctcggccgcgatcgccgagggg
gcggatgccgcggcctccggcgctgcgtggttcatggactatcgcaacgccgacgggtca
ctggccgagatgtgcggcaacggaacgcgcgtcttcgcacgctacctcgccgacgcgggc
ctcgcgtcgatcgaggccggactccgcatcggcacgcgcgccggcgtcaagacgatcacc
cgcgccgagaacggcttcgaggtcgacctcggtctctggcgcgccgaggagggcgacatc
ctggtgcgcgcgcgtggactcggcgtcgcccgacccgggcaggcgatcgacgtgggcaac
ccgcatgtcgtggtcgctctcgcgggcgaggcagagctcgacgggctcgacctgacgtcg
cagcccaccctcgacccgcatccggccgccggcgcgaacgtcgagttcgtcgtcccggcc
gagccgctcgtacagaacggtgtcggcgctatccgcatgcgggtctacgaacgcggagtg
ggggagaccctctcgtgcggcacgggggtcgcggcatccgcactcgccgtccgtttctgg
gcaggctcggcggcacccgatcggtggacggtcgacgtcccgggcggcacgctcggcgtg
cgcgtcgtgcgtcaggacgacggcgagcacgtgcttctctccgggcccgcgacgctggtg
ttctcggggcaggtcaccctcgccgactga
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