Microbacterium arborescens: QUC20_10330
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Entry
QUC20_10330 CDS
T09423
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mark
Microbacterium arborescens
Pathway
mark03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mark00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QUC20_10330
09124 Replication and repair
03420 Nucleotide excision repair
QUC20_10330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mark03021
]
QUC20_10330
03400 DNA repair and recombination proteins [BR:
mark03400
]
QUC20_10330
Enzymes [BR:
mark01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QUC20_10330
Transcription machinery [BR:
mark03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
QUC20_10330
DNA repair and recombination proteins [BR:
mark03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
QUC20_10330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
WJM14678
LinkDB
All DBs
Position
2176863..2178506
Genome browser
AA seq
547 aa
AA seq
DB search
MADGPLIVQSDRTVLLEVAHPNAEDARHELAIFAELERAPEHIHTYRITRLGLWNARAAG
HDAEDMLATLDRWSRFPVPPSVSTDIRETVTRYGRLVIERDDEGTLVLRSHDAAVLAEVT
RNKRIQPLLLGHPTPETYIIDAWARGQIKQELLKIGWPAEDLAGFTPGTPHEIELHEDGW
SLRPYQRKAVDIFTEGGSGVVVLPCGAGKTLVGAAAMADTKTTTLILVTNTVSARQWRNE
LLKRTSLTPEEIGEYSGQSKEVKPVTIATYQILTAKRKGEYAHLALLDALDWGLVVYDEV
HLLPAPVFKLTADLQARRRLGLTATLVREDGREGDVFSLIGPKRFDAPWKEIEAQGFISP
AVCYEVRVDLPASDRLEYAASADDERYRLAATAHAKIGVVRDLVAKHAGEQILVIGQYLD
QIDVLAEALGAPKITGSTPVDEREELYDAFRTGEVPVLIVSKVANFSIDLPDASVAIQVS
GSFGSRQEEAQRLGRLLRPKSNGHTASFYTLIARDTVDQDFAQNRQRFLAEQGYSYTILD
AEKLEAA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgatggccccctgatcgtccagagcgaccgcaccgtgctgctcgaggtcgcccac
ccgaacgcagaggacgcacgccacgagctcgcgatcttcgccgagctcgagcgtgcaccc
gagcacatccacacctaccgcatcacgcggctcggcctgtggaacgcacgtgcggccggg
cacgacgccgaagacatgctcgccacgctcgaccggtggtcgcgcttcccggtgccgccc
tcggtgtcgaccgacatccgtgagacggtgacgcgctacggacgtctcgtgatcgaacgt
gatgacgagggaacgctcgtgctgcgctcgcacgacgcggccgtcttggcggaggtcacc
cgcaacaagcggatccagccgctgctgctgggccaccccaccccggagacctacatcatc
gatgcctgggcgcgcggtcagatcaagcaggagctgctgaagatcggatggcccgccgaa
gacctcgccggtttcacccccggcacgccccacgagatcgagctgcacgaagacgggtgg
agcctgcggccctaccagcgcaaagccgtcgacatcttcaccgagggcggttcgggcgtc
gtcgtgctcccctgcggcgcgggcaagacgctcgtgggcgccgcggcgatggccgacacc
aagacgacgacgctcatcctcgtgaccaacaccgtcagcgcacggcagtggcgcaacgag
ctgctcaagcgcacgagcctgaccccggaagagatcggcgagtactccggtcagtcgaag
gaggtcaagccggtcacgatcgcgacctaccagatcctcacggcgaagcggaagggcgag
tacgcccacctcgcgctcctcgacgctctcgactggggcctggtcgtgtacgacgaggtg
catctgctccccgctcccgtgttcaagctgaccgccgatcttcaggcgcgacgccgcctc
ggcctgaccgcgaccctcgttcgcgaggacggccgcgaaggcgacgtgttcagcctcatc
ggacccaagcgattcgacgcgccttggaaggagatcgaggcccagggcttcatctccccc
gccgtctgctacgaggtgcgcgtcgacctcccggcatccgaccgcctcgagtacgccgcc
tcggccgatgacgagcggtaccgtctggcggcgaccgcgcacgcgaagatcggggtcgtc
cgagacctcgtcgcgaagcacgcgggcgagcagatcctggtgatcgggcagtacctcgat
cagatcgatgtgctcgcggaggcgctcggggcaccgaagatcacggggtcgactcccgtc
gatgagcgcgaggagctgtacgacgcgttccggacgggcgaggtccccgtgctgatcgtc
tcgaaggtcgcgaacttctcgatcgacctgcccgacgcctccgtcgccatccaggtctcg
ggctcgttcggctcgcgccaagaagaggcgcagcgtctcggacgcctgctgcgaccgaag
tcgaacggccacacggcgagcttctacaccctcatcgcgcgcgacaccgtcgaccaggac
ttcgcgcagaaccggcagcgcttcctcgccgaacagggatacagctacacgatcctcgac
gccgagaagctcgaggcagcctga
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integrated database retrieval system
