Microbacterium arborescens: QUC20_11380
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Entry
QUC20_11380 CDS
T09423
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mark
Microbacterium arborescens
Pathway
mark03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mark00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QUC20_11380 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mark03021
]
QUC20_11380 (rho)
03019 Messenger RNA biogenesis [BR:
mark03019
]
QUC20_11380 (rho)
Transcription machinery [BR:
mark03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
QUC20_11380 (rho)
Messenger RNA biogenesis [BR:
mark03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QUC20_11380 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
AAA_25
NACHT
Spore_III_AA
AAA_22
PIP5K
Motif
Other DBs
NCBI-ProteinID:
WJM14875
LinkDB
All DBs
Position
complement(2395460..2397547)
Genome browser
AA seq
695 aa
AA seq
DB search
MESNSENLTIDETVDAPNEETPAQPDAVVETPAEDVPAEEASPEVAPAAEEAAAPAVVAE
PEEKPAKAPRKRAPRRAKSTDVAPAAADETPAVAEAPAETPVTDAPTSTDAGAEPAAEAV
SADVAAAADESAPAAADAAVDEPADAEPAEAPKKPARGRGRGRNAKKDAEAEATPSPDAA
AEPGDAPAADSAAETPAEQAPETDASSDESSKSDSGEGDGESSGRSRSRSRNRNRNRNKD
NAQGNPGQAGQNQGGNQNQGGNQNQAGNNGPDDDDASGQNGRGRQRNKRRGQGGGGDEFE
TEINEDDILIPIAGVLDVLDNYAFVRTTGYLPGTQDVYVSLGQVKKYNLRKGDAVVGAIK
QPREGEQSSRQKYNALVKVDSINGLSVEDAADRVEFGKLTPLYPQERLRLETGPEKLTQR
IIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIAGAIAQNNPEVHLMVVLVDERPEEVTDMQ
RTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNLSAPT
SGRVLTGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGN
SELRLSRQLADKRIFPAVDVNASSTRREEMLLSSDEVKITWKLRRALAGLDQQHALGVIL
DKLKETQSNVEFLVQMQKSIPAPTTHSGGHDNSIR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtggagtccaactccgagaacctgacgatcgacgagactgtcgacgcaccgaacgaagag
acgcctgcgcagccggatgccgtcgtcgagacccccgccgaggacgtgcccgccgaggag
gcctcgcccgaggtcgcccccgctgcggaggaggctgccgcgcctgccgtcgtggccgag
cccgaggagaagcccgcgaaggctccgcgcaagcgtgcgccccgccgggccaagagcacg
gatgtcgcgcccgccgccgccgacgagaccccggctgtcgccgaggctcctgccgagacg
ccggtcaccgatgcgccgacgagcacggatgcgggcgccgagcctgctgctgaggcggtt
tcggccgacgtcgcggctgctgctgacgagagcgcacccgctgccgctgacgcggctgtt
gatgagcccgccgatgccgagcccgccgaggcaccgaagaagccggcccgcggccgtggg
cgcggccgcaacgcgaagaaggatgccgaggccgaggccaccccgagccccgacgccgcg
gccgagcccggcgacgctccggcggccgacagcgccgccgagactccggcagagcaggcg
ccggagacggacgcctcgtccgacgagtcgtcgaagtccgactccggtgagggcgacggc
gagtcgtccggtcgctcgcggagccgttcacgcaaccgcaaccgcaaccgcaacaaggac
aacgcccagggcaacccgggccaggccggccagaaccagggcggcaaccagaaccagggc
ggcaaccagaaccaggccggcaacaacggccccgacgacgatgacgcctcgggccagaac
ggccgtggccgccagcgcaacaagcgccgcggtcagggcggcggtggcgacgagttcgag
accgagatcaacgaggacgacatcctcatcccgatcgccggtgtgctcgatgtcctcgac
aactacgcgttcgtccgcacgaccggctacctgccgggtactcaggacgtctacgtctcg
ctcggacaggtcaagaagtacaacctgcgcaagggcgacgccgtcgtcggcgcgatcaag
cagccgcgtgagggcgagcagtcgagccgccagaagtacaacgcgctcgtcaaggtcgac
tccatcaacggcctgtcggtcgaggacgccgccgaccgcgtcgagttcggcaagctcacg
ccgctgtacccgcaggagcgtctgcgcctcgagaccggccccgagaagctgacccagcgg
atcatcgatctcgtggctccgatcggaaagggacagcgcggtctcatcgtcgcgccgccc
aaggccggcaagacgatcgtgctgcagcagatcgcgggcgcgatcgcgcagaacaacccc
gaggtccacctcatggtcgtgctcgtcgacgagcggcccgaagaggtcaccgacatgcag
cgcaccgtcaagggcgaggtcatcgcctcgaccttcgaccgtcccgcagaggaccacacg
acggtcgccgagctcgcgatcgagcgtgccaagcgtctggtcgagctcggccgcgacgtc
gtcgtgctgctcgactcgatcacgcgcctcggccgcgcgtacaacctgtcggccccgacg
tcgggccgtgtcctcaccggtggcgtcgacgcgtcggcgctgtacccgccgaagcgcttc
ttcggtgcggcacgcaacatcgagaacggcggctcgctgacgatcctcgccacggcgctg
gtcgagaccggttccaagatggacgaggtcatcttcgaggagttcaagggcacgggcaac
agcgagctgcgcctgtcgcgtcagctggccgacaagcgcatcttccccgccgtcgatgtc
aacgcttcctcgacgcgtcgtgaagagatgctgctctcctccgacgaggtcaagatcacg
tggaagctgcgtcgcgccctcgccggcctcgaccagcagcacgcgctcggcgtcatcctc
gacaagctcaaggagacgcagtccaacgtcgagttcctcgttcagatgcagaagtcgatc
ccggcgccgaccacgcactccggcgggcacgacaacagcatccgctga
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