Marinobacterium sp. LSUCC0821: HH196_01150 Help Entry HH196_01150       CDS       T08388                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism marl  Marinobacterium sp. LSUCC0821 Pathway marl02020   Two-component system marl02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:marl00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     HH196_01150  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     HH196_01150  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:marl03021]     HH196_01150 Transcription machinery [BR:marl03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      HH196_01150 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID Motif Other DBs NCBI-ProteinID:  QJD70396 UniProt:  A0A858QVT2 LinkDB All DBs Position complement(221304..222857) Genome browser AA seq 517 aa AA seqDB search MKHSLQLKIGQSLTMTPQLQQAIKLLQLSSLELQTEIQNALDNNPLLELAEEEENESVES TDDFESESEQSIDHSESNEFESEFDSPSFNDESLLSDNQNEDSSQEFGDEQWSDAIPEHL STDSQWDDTYQSSDFSSRDDDWMPGDNESADETIQDHLSWQLNLTRLSDIDRHVAEIIID SIDERGYLTTALDEILLSCQEELPELFFEVELDEVETVLHRVQQFDPPGVGARDLSECLK IQLRQLPQDTPWRAEALRLVTDYLDLLGASDFKTLVRRLRIKEHELTSVIQLIQSLNPTP GEQLSLGRTDYVIPDVIVRKRSGEWIVILNSDAAPEIRINETYSALINEHSSDEGQQFLR DQLQDARWFLKSLQSRNETLLRVSSEIVARQVEFLDIGDEGMKPLVLHDIADAVEMHEST ISRVTTQKYMLTPRGVFELKYFFSSHVGTADGGAASSTAIRAIIKKLISEENPRKPLSDS KLATLLEEEGVNVARRTIAKYREALNIPPSNERKRLV NT seq 1554 nt NT seq  +upstreamnt  +downstreamnt atgaagcactcacttcaattaaagatcgggcaaagcctgaccatgaccccacaattgcag caagcaatcaaactgctgcaactatcgtcgctagaactccaaacagagattcagaatgcc ctcgacaacaacccgctgctagagcttgcagaggaagaggagaacgaatctgtcgaatca actgatgattttgagagtgagtcagagcaatcgatcgatcactccgaatcaaatgagttc gaatcagagtttgattcaccttcattcaacgacgagagtttactctctgataatcagaat gaagatagctctcaagaatttggagatgaacagtggtcagatgcgataccagagcatcta agcaccgatagtcagtgggatgacacctaccagtcgagcgacttcagtagtcgtgatgat gattggatgccaggcgataatgagagtgccgatgaaacgattcaagaccacctcagctgg cagttaaatttaactcgactctctgatatcgatcgccacgtggctgaaataatcatcgac tcgattgatgagcgtggctatttaacaaccgctctggatgagatccttttgagctgccaa gaggagttaccagaactctttttcgaagtagagcttgatgaggtcgaaactgtactgcat cgtgttcagcagtttgatcctccaggcgttggtgcacgcgacctatcagagtgtttaaag atacaacttcgccaacttcctcaggatactccctggcgcgctgaagcacttcgtctagtc actgattaccttgacctattaggtgctagtgatttcaaaacactagtccgccggttacga atcaaagagcacgagctcaccagtgtcattcaattgatacaaagtttaaatccaacacct ggcgaacaactatcccttggccgaacagactacgttatcccagatgttatcgttagaaag cgttctggtgagtggatagtaatccttaactctgatgcggcgcctgaaatcagaatcaat gagacctactccgccctcattaatgagcactctagtgatgagggccagcaatttcttaga gatcaactgcaggatgcacgttggtttctaaaaagcttgcagagccgaaatgaaacttta ttaagagtatctagcgaaatagttgctaggcaggtagagtttttagatattggtgatgaa ggtatgaagcctctcgtgcttcacgatatagctgatgcggttgagatgcacgagtcgacc atatctcgtgtgaccacccagaaatatatgctcaccccgcgtggtgtttttgagttgaag tactttttctcaagccatgtagggactgcagatggcggcgcggcctcttctacagcgatt cgtgccatcattaaaaaattaatttcagaagaaaatccaagaaaacctctaagtgacagc aaacttgctacactgctagaagaggaaggagttaatgttgctcgtagaacaatcgcaaaa tatcgcgaagcactgaacattccaccttctaatgaacgaaaacgtttggtttaa

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