Marinobacterium sp. LSUCC0821: HH196_02795
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Entry
HH196_02795 CDS
T08388
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
marl
Marinobacterium sp. LSUCC0821
Pathway
marl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
marl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HH196_02795 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marl03400
]
HH196_02795 (uvrB)
DNA repair and recombination proteins [BR:
marl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HH196_02795 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HH196_02795 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Kinesin
Motif
Other DBs
NCBI-ProteinID:
QJD70691
UniProt:
A0A858QWK8
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All DBs
Position
549781..551832
Genome browser
AA seq
683 aa
AA seq
DB search
MKVPFEVRSKFEPAGDQPKAIEGLVDGLESGLAAQTLLGVTGSGKTFTIANVIAQVQRPT
IILAHNKTLAAQLYGEFKEFFPNNSVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERDDAIIVATVSAIYGLGDPKAYLAMMLHLDRGDRIDQRALLRRLAELQ
YTRNDIELHRGTYRVRGDVIDIFPAESERESLRVELFDDEIEQLAWFDPLTGEVLRKVPR
ATVYPKTHYVTPRETLLDAVEHIKDELRDRLKQLRDHDQLVAAQRLEQRTLYDIEMILEL
GYCSGIENYSRYLSGRGAGMPPPTLFEYLPDNALLVIDESHVTVPQLGAMYRGDRSRKET
LVEYGFRLPSALDNRPLKFEEWEELAPQMIFVSATPSKYEAANAQAIVEQVVRPTGLIDP
TVEVRPASSQVDDLLAEVRLVADKNERCVVTVLTKRMAEDLTEYLAEHGVKVRYLHSDID
TVERVEIIRDLRIGEFDVLVGINLLREGIDMPEVSLVAILDADKEGFLRSDTSMIQTIGR
AARNVNGRAILYADKITGSMQRAMDETARRREKQVAFNEEHGIVPRGIQKSVADILEGAT
IPGKKAGSKASRKVAEVEAVYTPGDKPLSPKDLAKALSRIEDQMYEAAKNLEFEKAAQLR
DQLQQLKHASLETGWSGDAALTD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgccgtttgaagtgcgctcaaaatttgagcctgctggtgaccagccgaaagcg
attgaggggttggtggatggccttgaatccggcttggcggcacagacgctgttgggtgtt
acggggtcgggtaaaacctttactattgccaacgttattgctcaggttcagcgacctacg
attatccttgcgcacaacaaaaccttggctgcgcagctctatggtgaatttaaagagttc
tttccaaataactctgtagagtatttcgtctcctactacgactactaccagccagaggcc
tacgtcccatcgtcagataccttcattgagaaggatgcctcgatcaatgatcatatcgag
cagatgcgtctatctgcgacgaaagcgctgcttgagcgtgatgatgcgattatcgtagcc
actgtctctgcgatttatggcttgggtgaccctaaggcctacctagcgatgatgcttcac
ctggatagaggtgatcggatcgatcagcgtgcacttctgcgtcgtctagctgagctgcaa
tacacccgcaacgatattgagctgcatcgaggtacctatcgagtgcgcggtgatgtgatc
gatatttttcctgctgaatctgagcgtgaatcgctacgtgttgaactgtttgatgatgag
attgaacagctggcgtggtttgatccactcacgggtgaggttttgcgtaaagtaccgcgc
gctaccgtctatccaaaaacgcactatgttaccccgcgtgaaacgctgcttgatgcggtt
gagcatatcaaagatgaattgcgcgataggctaaagcagctgcgtgatcacgatcagcta
gttgctgctcagcgtcttgagcagcgcacactctatgatattgagatgattcttgagttg
ggttactgctcggggattgagaactactctcgctatctatctggccgcggcgccggtatg
ccaccaccaacgctatttgaatacttgcctgataacgctctgcttgtgattgatgagtcg
cacgtgaccgttccccaattgggtgcgatgtatcgtggagaccgttcccgtaaagagacg
ctcgttgagtatggtttccgcttgccatctgctttggataaccgcccactgaagtttgaa
gagtgggaggagttggcgccgcaaatgatctttgtttcagctacaccaagcaagtatgaa
gcagcgaatgcgcaggctatcgtagagcaggttgttcgccccactggcttgattgatcca
actgtagaggtgcgtccggcatcgtctcaggttgatgatctgcttgctgaagtgcgtcta
gttgcggataaaaatgagcgctgtgttgtcactgttttaactaaacgcatggcggaagat
ctgaccgaatatcttgctgagcatggcgtcaaggtgcggtacctgcactccgatattgac
actgttgagcgcgtagagattattcgggatctacgtataggtgagtttgatgtgttggta
ggtatcaaccttcttcgagaaggtattgatatgccagaggtgtcgcttgtggctattctt
gatgcagataaggagggcttcttgcgctctgatacctcgatgattcagaccatcggacgt
gctgcgcgaaatgttaacggtcgtgctattctctatgcagataaaattaccggatccatg
cagcgtgcgatggatgaaaccgcgcgccgtcgtgaaaaacaggttgcctttaacgaagag
catggaatagtaccgcgtggcattcaaaaatccgtggccgatattctagagggagcgact
attccgggtaagaaggcaggctctaaagcgtcacgtaaagttgctgaagtggaagctgtt
tacacgcctggtgataaacccctctcacccaaggatctggcgaaagctttatctcgaatt
gaagatcagatgtacgaagctgccaaaaatcttgaatttgagaaggcggctcaactgcga
gatcaattgcagcaattgaaacacgcttctttagaaactggttggagcggtgatgcagct
ctaacggattga
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