Marinobacterium sp. LSUCC0821: HH196_02830
Help
Entry
HH196_02830 CDS
T08388
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
marl
Marinobacterium sp. LSUCC0821
Pathway
marl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HH196_02830 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marl03400
]
HH196_02830 (recB)
Enzymes [BR:
marl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HH196_02830 (recB)
DNA repair and recombination proteins [BR:
marl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HH196_02830 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
QJD70698
UniProt:
A0A858QWV0
LinkDB
All DBs
Position
560758..564423
Genome browser
AA seq
1221 aa
AA seq
DB search
MKPMLPLHFPLKGTSLIEASAGTGKTYTLAALYVRLVLGQGGEQAFPKALLPPEILVVTF
TNAATLELRDRIRQNLAKSAEVFRGAETKDQFTLDLVAEYPDAEARESAAIRLERAADWM
DEAAIYTIHGWAQRVLTMFAFDSNSAFNQTLADSENDILAEAARDYWRIHCSQLPAAVAE
QIGSVLVSPTKLQGWAKKLVGRDLGLCWQGSEIDQGIPPEKLKAAIQQWLAACQDAESKL
LLTWRESGSAVVDELNQTLEAGSFNGTRVKAAKLAESIAAMNLWIEDGLSVPAQSVIEYL
VFDQSKMKKGQQAPLHAADSIMRAYLDIRANRPNLAPVVGHALGWIADRFESLKSQVGLL
DFNDLLLKLRAGLRGKRGAQLALRIRDLYPVAMIDEFQDTDAVQFEIFNRIYGELDKQAD
SPYAWLMIGDPKQAIYSFRGADIHTYLSARKQVQDSLYTLDTNYRSSKSVVTAVNCLFEH
ADTKSQGAFLFSQPDEASPLPFTPIKAKGLEQSVTIGGDSLQGLRLMHLELSDETSADQY
RERLARYTAERIATLLAGSAEARVLVGDKPLVASDIAILVRSGREAAAVRAALNELSIGS
VYLSDKESIYQSNEALDLWRILQAVANPRSQALVLSALASPLLGMDRNWLAQLRDDEVAW
EGEAQRFIELQLLWRRTNIAALVQRLISEFNLPQRLRGRLGDASERTLTNMLHLGEILQR
HSQSLDGELGLIRHLGEMIKQPQGASEEQLVRMESDAGRVQVITLHKSKGLEYPLVFIPY
GVSSRKASIGEDGLVFREGDRAQLELLNSQASSKVKEEKEAADLERLQEDIRLLYVGLTR
AKYCCWLGIANIRGVADSAFASLMSVSGKGEALAESLQNALVQLNQSDAIALEAVDESSA
PVRKVSVIETPLIPARQLERAVVQERWWVTSYSAIASRVESSSDAFDESLALSLAGEQDN
GTPINSAINEFEQAKAGTIHAFERGAVPGNFLHELLESAALLGFEQVAQDSTLLETLIPL
ESLPERWQAERGMLLNWLQATLVADLQLGSNSQLQSLQLYQPEMEFLFAAHEVDLEQLDV
LCHQAINPELQRPKLKHDQVNGMLKGFIDLTFVDNDQYWVCDYKSNWLGPDANSYDLQAM
SQALVEHRYDLQLMIYLLALHRMLLARDSEYRANPQLGYETRVGGALYVYLRGFPEGAGV
LKNRPDYQFVEQMDQLFRGEC
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctatgttgcctctccatttccctctaaaggggacaagtctaattgaggcgagt
gccggtaccggtaaaacctatacgctcgcggccctctatgtgcgtttagtcttaggtcag
ggtggtgagcaagcctttccgaaagcgttactgccaccagagattctcgtagttaccttt
accaatgcagcaacccttgagctgcgtgatcgtattcgccagaaccttgcaaagagtgca
gaggtctttaggggtgctgaaacgaaagatcagttcactctggatctggttgcagagtac
cctgatgccgaggcacgcgagagtgcagctattcgtcttgaaagggctgctgactggatg
gatgaggcagccatctacacgattcatggctgggcacagcgcgtgctgacgatgttcgcc
ttcgatagcaatagcgccttcaaccagacactggctgacagtgaaaacgatatcttggct
gaggctgctagggactattggcgcattcattgttcccagttacctgcagctgtagctgag
cagataggttcggtgctggtctcacctacgaagctacaaggttgggctaaaaagctagtc
ggtcgtgatcttgggctctgctggcagggcagtgagatagatcaaggcataccccctgag
aagttaaaagctgcgatacaacagtggctagcagcctgccaagatgcagagagtaaactt
ctcttaacttggagagagagtggtagcgctgttgttgatgagttaaatcagacgcttgaa
gcgggaagtttcaatggtacccgagtcaaagcggctaagttggccgagtcgatagcggcg
atgaatctctggattgaagatggtttatcagttcctgcgcagtcagtgattgagtacctc
gtgtttgatcagagcaagatgaaaaagggtcagcaggcgccactgcacgccgctgattca
attatgcgtgcctatctcgatatacgagctaaccgtcctaatctagcgccagttgttggg
catgccctgggctggatagcggatcgttttgagtcgttaaagtctcaggttgggctgctc
gattttaatgacctgttacttaagttgagggcggggttacgtggcaaacgcggcgcacag
cttgcgctgcggattcgtgatctctacccagtcgctatgattgatgagtttcaggatacc
gatgctgtgcagtttgagatctttaataggatctatggtgagctcgataaacaagcagat
tcaccctatgcatggttgatgatcggtgaccctaagcaggcgatatacagcttccgaggc
gcagatattcatacctatctatccgctcgtaaacaggttcaagattcactttatacactt
gataccaattaccgttcgtcaaagtctgtcgtgactgcggttaactgcctctttgaacat
gccgataccaagtcgcaaggggctttcctcttttcacaacctgatgaagcatcgccgctg
ccgtttacgccgattaaagccaagggcttggagcagagtgtaacgatagggggcgattct
ctacaggggctgcgtcttatgcatctggaactatcggatgagacaagtgccgatcagtat
cgagagaggcttgctaggtacacagcagagcgaatcgccactttgttggctggctctgct
gaggctagggttctagtgggtgataagcccctggttgctagcgatatagcgatattggtg
agaagtggtcgagaggccgcagcagtgcgagctgcattgaatgagttatctataggatcg
gtttacctctccgataaagagagtatctatcagtcaaatgaagcgcttgatttatggcga
attctgcaggcagtcgctaaccctcgcagccaggcgttggtgctctctgcgttagcttct
ccgttgttgggaatggatagaaattggctagcgcagttgcgtgatgatgaggtggcttgg
gaaggtgaggcgcagcgttttatcgaactgcaattactgtggcgccgaacaaatatcgca
gccctagtacaacgcctgattagtgaatttaatcttccgcaacgtctacgaggtcgtttg
ggtgatgcgtcagagcgaaccttaactaacatgcttcatctcggtgagattctgcagcgc
cactcacaaagcttagatggtgagctgggcctaattcgtcacctaggtgagatgatcaag
cagccacaaggtgcctctgaagagcagttggttcgtatggagagtgatgctggccgtgtg
caggtgattacacttcataaatccaagggtctagagtaccccttagtcttcatcccttat
ggtgtaagttctcgcaaagcctcgatcggtgaagatggattggtctttagagagggagat
agagcacagcttgagttgttaaattcgcaagcctcttcaaaagtaaaagaggagaaagag
gctgccgatttagagcgtctgcaagaggatattcgactcctctatgttggccttacgcgt
gctaagtattgctgctggttgggaattgccaatatacgtggtgttgctgactctgctttt
gcatcgttaatgagtgtctcgggtaagggcgaggcgttggctgaatcactgcaaaatgca
ttggtccaacttaatcagagtgatgcgattgcgttagaggcggtagatgagagtagtgcc
ccagtcagaaaagtatcagttattgagacgcctttgatacccgcccgccagttggagaga
gcagtagtacaagagcgttggtgggtgaccagttacagtgcgatagccagtcgcgtagag
tcatcttcagatgcttttgatgagagcttggcgctcagtttagcgggtgagcaagataac
ggcactccaatcaattcagccatcaatgaatttgagcaggctaaagccggtactattcac
gcctttgagcgtggcgctgttccaggtaacttcttgcacgaactgcttgagagtgcagcg
ctgcttggatttgaacaggtcgcacaggattcaaccctgttagaaacacttattccatta
gaatcgctaccagagcgttggcaggctgagcgaggcatgttgctaaactggctacaggcg
accctggttgcggatctgcagttaggctccaacagccagcttcaatcactgcagctctat
caaccagagatggagtttctgtttgcagctcatgaagttgacctcgaacagttggatgtt
ttgtgtcatcaagcgattaacccagagctgcagcgtcctaagctcaagcatgaccaggtg
aatggtatgttgaagggctttatcgacttaacgttcgtggataacgatcaatactgggtt
tgtgactataaatcgaattggcttggaccagacgcaaatagttatgacctgcaagcgatg
agccaggctctagtggaacaccgttatgatcttcagttgatgatctaccttttggcgctc
catagaatgctgcttgcgcgcgatagtgagtatagggccaatccacagttgggctatgag
actcgagtcggtggtgctctctatgtttatcttcgaggcttccctgaaggggcgggtgtt
ctgaaaaacagaccggactatcaattcgtagagcagatggatcagctatttaggggagag
tgttaa
DBGET
integrated database retrieval system
