Marinobacterium sp. LSUCC0821: HH196_04220
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Entry
HH196_04220 CDS
T08388
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
marl
Marinobacterium sp. LSUCC0821
Brite
KEGG Orthology (KO) [BR:
marl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
marl03016
]
HH196_04220 (truA)
Enzymes [BR:
marl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HH196_04220 (truA)
Transfer RNA biogenesis [BR:
marl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HH196_04220 (truA)
Prokaryotic type
HH196_04220 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QJD70944
UniProt:
A0A858QX74
LinkDB
All DBs
Position
complement(868225..869058)
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AA seq
277 aa
AA seq
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MSDIDQNNEATEVASFRYALGVEYAGAKFHGWQIQSDEGVRTVQEEVERALSVIANHPVS
VICAGRTDTGVNGSYQVIHFDSQIERPERAWVLGTNSQLPDDVAILWSKPVDNTFHARFS
AQARRYRYLIYPSPVKPAILARGVTWTHKELELSRMQAAAKHLVGEHDFSSYRAVACQAH
SPVRTIHSLEVYQRGQIIVIDVQANAFLHHMVRNIAGVLMKIGSGEAEIDWSKEVLEARD
RRKGGVTAPPWGLYFVDVQYPDQYQLPEGGKGPFFLS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatagatcaaaacaacgaggcgactgaggtcgcctcgtttcgttatgcactg
ggtgtagagtacgcaggtgcaaagtttcatggttggcagattcagtcagatgagggggtg
cgcacagtccaagaggaggttgagcgcgccttatctgtgatcgccaatcaccctgtaagt
gtcatctgtgctggacgtaccgatacaggtgttaacggctcctatcaggtgattcacttc
gattctcagatagagcgtccagagcgtgcctgggtcttgggtacaaactctcagcttccg
gatgatgttgctattctctggtcaaaacctgttgataatacctttcatgcgcgtttctct
gcacaggctaggcgttaccgttatctcatctacccatcacctgtaaaaccagcgatattg
gcgcgtggtgtcacctggacacacaaagagctcgagttgtctcgcatgcaggcagcggca
aagcatctggtcggcgaacatgacttcagctcctatcgagctgtggcttgtcaggcacat
agtcctgtaaggactattcactcgcttgaggtctatcaacgcggccaaattatcgttatt
gatgtgcaggccaatgcttttctccaccatatggtgcgaaacattgcaggggtattgatg
aagataggctctggagaggctgaaatcgattggtcaaaagaggttttagaggcgcgagat
cgccgaaaaggtggcgtgacagcaccgccttgggggctctatttcgtcgatgttcagtac
ccagatcagtatcaacttcctgaaggtggaaaaggtccatttttcttgtcttag
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