Marinobacterium sp. LSUCC0821: HH196_05525
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Entry
HH196_05525 CDS
T08388
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
marl
Marinobacterium sp. LSUCC0821
Pathway
marl03030
DNA replication
marl03430
Mismatch repair
marl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HH196_05525 (dnaQ)
03430 Mismatch repair
HH196_05525 (dnaQ)
03440 Homologous recombination
HH196_05525 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marl03032
]
HH196_05525 (dnaQ)
03400 DNA repair and recombination proteins [BR:
marl03400
]
HH196_05525 (dnaQ)
Enzymes [BR:
marl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HH196_05525 (dnaQ)
DNA replication proteins [BR:
marl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HH196_05525 (dnaQ)
DNA repair and recombination proteins [BR:
marl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HH196_05525 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Orthopox_F6
Motif
Other DBs
NCBI-ProteinID:
QJD71191
LinkDB
All DBs
Position
complement(1168170..1168877)
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AA seq
235 aa
AA seq
DB search
MSRQIVLDTETTGLEPDEGHNIIEIGCVEMVARRITGNNYHQYIKPDREVDAEAIEVHGI
TNQFLEDKPKFSEVVAEFVEFVRGAELIIHNAAFDVGFINKEFQRNGIDEKIEDICTITD
SLALARKKHPGQKNSLDALCRRYFIDNSHRELHGALLDSEILADVYLALTGGQTSLILSV
DGQDDGEGGEKIRRVAADLVEGLQVIKASDEELAAHETFLDLLDKKSDGAVWRNL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcaaatcgtacttgataccgagactacaggtcttgaacccgatgagggtcac
aacattattgagattggttgtgttgagatggtcgctcgacgcattacaggcaacaactat
catcaatacattaagcccgatcgagaagtggacgctgaagcgattgaggttcacggtatc
accaatcagttcttggaagataagccgaaatttagtgaggttgttgctgagtttgttgag
tttgttcgtggcgcagagctgatcattcataacgcagcgttcgacgttggcttcatcaac
aaagagtttcagcgcaatggtatcgatgagaagattgaagatatctgtaccatcaccgac
agtttggcgttggctcgtaagaaacacccaggccaaaaaaacagcctagatgcactctgt
cgccgttactttatcgataacagtcaccgtgagctgcacggcgcacttctcgactcagag
atcctagcagacgtatatctcgcccttaccggcggccaaacttcgttaattctctctgtc
gatggtcaggatgacggagagggtggtgaaaagattcgtcgtgttgcagcagatcttgtt
gaaggtcttcaagtcattaaagcatctgacgaagagttagccgcgcatgagacttttctc
gatctgctcgataaaaagtcagacggagctgtgtggcgcaacctatag
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