Marinobacterium sp. LSUCC0821: HH196_05590
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Entry
HH196_05590 CDS
T08388
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
marl
Marinobacterium sp. LSUCC0821
Brite
KEGG Orthology (KO) [BR:
marl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marl03032
]
HH196_05590
03036 Chromosome and associated proteins [BR:
marl03036
]
HH196_05590
03400 DNA repair and recombination proteins [BR:
marl03400
]
HH196_05590
DNA replication proteins [BR:
marl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HH196_05590
Chromosome and associated proteins [BR:
marl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HH196_05590
DNA repair and recombination proteins [BR:
marl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HH196_05590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
FIMAH
Motif
Other DBs
NCBI-ProteinID:
QJD72354
UniProt:
A0A858R121
LinkDB
All DBs
Position
complement(1182839..1183135)
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AA seq
98 aa
AA seq
DB search
MFPKGNNVNKSELIDSIAASADLPKAAAGRALDAALEAVTAALAKGDSVALVGFGTFTVK
SRAARTGRNPQTGAPIQIAAATLPTFKPGKALKDAVNK
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atatttccaaaggggaacaacgtgaacaaatctgaactaatcgattcaatcgcagcatca
gcagatcttccaaaagcagcagctggtcgtgctcttgatgcagcactagaagcagtaact
gcagcactagctaaaggcgactcagttgctttagttggcttcggtactttcactgtgaaa
tcacgtgcagcacgcactggccgtaacccacagactggtgcaccaatccagatcgctgcg
gctactctgccaactttcaagccaggtaaagctctgaaagacgcagtaaataagtaa
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