Marinobacterium sp. LSUCC0821: HH196_06000
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Entry
HH196_06000 CDS
T08388
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
marl
Marinobacterium sp. LSUCC0821
Brite
KEGG Orthology (KO) [BR:
marl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marl03032
]
HH196_06000
03036 Chromosome and associated proteins [BR:
marl03036
]
HH196_06000
03400 DNA repair and recombination proteins [BR:
marl03400
]
HH196_06000
DNA replication proteins [BR:
marl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HH196_06000
Chromosome and associated proteins [BR:
marl03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
HH196_06000
DNA repair and recombination proteins [BR:
marl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HH196_06000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
TetR_C_30
Motif
Other DBs
NCBI-ProteinID:
QJD71276
LinkDB
All DBs
Position
complement(1269326..1269622)
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELIERLIERHPELSVKDVELAVKIMLNHMADTLSDGERIEIRGFGSFSLHYRAPRV
GRNPKTGESVSLGSKYVPHFKPGKELREQVNASLKDER
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatctgagttaatcgaacgcctaattgagaggcatcctgagctttcagttaag
gatgtggaattggccgtgaagataatgctaaaccacatggctgacacgctctcagatggt
gaacgcatcgaaattcgtgggtttggaagtttctctctccattaccgagcacctcgagtg
ggacgtaaccctaaaacgggtgagtctgtctctttaggttctaaatatgtaccccatttt
aagcctggtaaagagctgcgtgagcaggttaatgccagtctcaaagatgaacgctag
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