Marinobacterium sp. LSUCC0821: HH196_06035
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Entry
HH196_06035 CDS
T08388
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
marl
Marinobacterium sp. LSUCC0821
Brite
KEGG Orthology (KO) [BR:
marl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marl03032
]
HH196_06035 (gyrA)
03400 DNA repair and recombination proteins [BR:
marl03400
]
HH196_06035 (gyrA)
Enzymes [BR:
marl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HH196_06035 (gyrA)
DNA replication proteins [BR:
marl03032
]
Prokaryotic type
DNA Topoisomerases
HH196_06035 (gyrA)
DNA repair and recombination proteins [BR:
marl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HH196_06035 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QJD71282
LinkDB
All DBs
Position
complement(1277318..1279981)
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AA seq
887 aa
AA seq
DB search
MGDLAREVLPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMNELGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMKKISHELLSDLDKETVDYVDNYDGTEKIPAVLPTRVPNLLVNGSAGIAVGMAT
NIPPHNLGEVVRGCLAMIDNPDITIDELLEFIPGPDFPTGGIINGRAGILQAYRTGRGRI
YVRAKHHVEDHPKTGRPMLVITEIPYQLNKARLIEKIAELVKEKKIEGISELRDESDKDG
MRIVIELRRGEVPDVIINNLFTQTQLQSVFGINMVALVDGQPRLLDLKSALECFIRHRRE
VVTRRTVYLLRKARERGHILEGLAIALANIDPVIELIKRSPTPADAKEALIATAWQPGQV
LDMLERAGEDACRPEGLEAQFGLREGSYYLSPAQAQAILELRLHRLTGLEHEKLIEEYRE
LIDRIAELLEILGSHERLMEVIREELNELVAEYADDRRTEIIASMQDLTIADLITEEEMV
VTISHGGYAKTQPLTAYQAQRRGGKGKAATSIKEEDFVEHLLVTNSHDTILCFTNFGKVY
WLRVFEIPQASRTSRGRPMVNILPLAEGERISTILPVKEFDDERCIFMATANGTVKKTRL
SAFARPRSTGLIALDIIEGDRLIGAALTNGDDYVMLVSSAGKAIRFHENDVREMGRTARG
VRGIKVDGEASVISLIIPQENGAILTASDKGYGKKTKSEDFPLRGRGGMGVIAMQCTDRN
GPLAGAVQVFDGDDVMLISDQGTMVRTRTSEISSLGRNTQGVRLIRVADDEKLIGLARIE
EPEEDEELEGSEAQGEGDNGAQAPVVNEEATDAVEGEDDAADDSEEE
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacctagctagagaagtacttccagttaacattgaagacgagctgaagcagtcg
taccttgattacgcaatgagtgtaatcgtagggcgagcgcttccagatgcacgagatggc
ttgaagccggtgcaccgccgtgtgctctttgccatgaatgagctcggcaacgactggaat
aaaccctataaaaaatctgcacgtgtggtgggtgatgtaatcggtaaataccacccgcac
ggtgatagtgctgtttacgacaccatcgtacgtatggcgcaagatttctcgatgcgctac
atgcttgttgatggtcaaggtaacttcggttctgtagacggtgactctgcagcagcaatg
cgttacaccgagatccgtatgaagaagatctcgcatgagcttctttctgatctcgataaa
gagaccgtagattacgttgataactacgacggtactgagaaaattcctgcggtattgcct
acgcgtgtacctaaccttttggtgaatggttcggcgggtattgcggttggtatggccacc
aacatcccaccgcacaacctaggtgaagtggtacgtggctgtctggcgatgatcgacaat
ccagatataacgattgatgagctgcttgagtttatcccgggtccagatttcccaacaggc
ggtattattaatggtcgtgcgggtattctgcaggcttaccgtacaggtcgcggccgtatc
tacgtgcgtgctaaacaccatgtcgaggaccaccctaaaacgggtcgtccaatgcttgtt
atcaccgagattccttaccagcttaacaaagcgcgtctgattgagaagatcgcagagctt
gtaaaagagaagaagatcgaaggtatcagcgagctgcgtgatgagtccgataaagatggt
atgcgtatcgtcatcgaacttcgccgtggtgaagtgccggatgtcataattaataaccta
tttactcagacgcaattgcagagcgtgtttggtatcaacatggttgctcttgttgatgga
cagccgcgtctacttgatctgaaatctgcgctcgagtgtttcattcgtcaccgtcgtgaa
gttgttactcgtcgtaccgtttacctgcttcgtaaagctcgtgaacgtggtcatatcttg
gaaggtttggcgattgcgctggcgaatatcgaccctgtaatcgagttgatcaaacgctct
ccaacgcctgcagatgctaaagaggcgctaattgcgactgcttggcagcctggtcaggtg
ctcgatatgttggagcgtgctggtgaagatgcttgtcgtccagaaggtcttgaagctcaa
tttggtctgcgcgaaggttcttactacctatcacctgcacaggctcaagcaattcttgag
ttgcgtctacaccgtctaaccggtctagaacacgaaaaactgattgaagagtaccgtgag
ctgatcgatcgcatcgctgagctattagagattcttggttcgcacgagcgtctaatggaa
gtgattcgcgaagagcttaatgagctagttgctgagtacgctgatgatcgtcgcactgaa
attatcgcttcgatgcaggatctaacaatcgctgatctgatcacagaagaggagatggtt
gtgaccatctctcacggtggctacgctaagacccagccgttgactgcttaccaagcgcag
cgtcgtggtggtaagggtaaagctgcgacttcgatcaaagaggaagattttgttgaacac
ctattggtaaccaatagtcacgataccatcctctgtttcaccaacttcggtaaagtttac
tggttgcgtgtgttcgaaattccgcaggcgagccgtacttcacgtggccgcccaatggtg
aatattctgccgttggccgaaggtgagcgtattagtactatcctgccggttaaagagttt
gatgatgagcgttgtatcttcatggcgacagctaacggtaccgttaagaagactcgcctg
tctgcattcgcacgtcctcgtagcacaggtcttattgcattggatatcattgaaggtgac
cgtctgatcggtgcagcgctaacaaacggtgacgactacgtcatgcttgtaagctctgct
ggcaaagcgatccgtttccatgaaaatgatgttcgtgaaatgggccgtacagctcgtggt
gtgcgtggtattaaggtcgatggcgaagcatctgttatctcgctaatcattccgcaagag
aatggtgcgatccttactgcctctgataagggttacggtaagaagaccaagtctgaagac
ttcccacttcgtgggcgtggcggtatgggtgtcattgctatgcagtgcacagatcgtaac
ggtccactggctggtgctgttcaagtatttgatggtgacgacgtgatgctgatctcggat
cagggcaccatggttcgtacccgtacatctgagatctcttcacttggccgtaacactcaa
ggtgttcgtctgattcgggttgcagatgatgagaagttgattggtttggcgcgtatcgag
gagcctgaagaggatgaagagctagaaggttctgaagctcagggtgaaggcgataacggt
gcacaggctccagttgttaatgaagaagcaacagatgcggtcgaaggtgaagacgacgcg
gctgatgattcggaagaagagtaa
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