KEGG   Marinobacterium sp. LSUCC0821: HH196_07060
Entry
HH196_07060       CDS       T08388                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
marl  Marinobacterium sp. LSUCC0821
Pathway
marl03030  DNA replication
marl03430  Mismatch repair
marl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:marl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HH196_07060
   03430 Mismatch repair
    HH196_07060
   03440 Homologous recombination
    HH196_07060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:marl03032]
    HH196_07060
   03400 DNA repair and recombination proteins [BR:marl03400]
    HH196_07060
Enzymes [BR:marl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HH196_07060
DNA replication proteins [BR:marl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HH196_07060
DNA repair and recombination proteins [BR:marl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HH196_07060
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: QJD71473
LinkDB
Position
complement(1473153..1473782)
AA seq 209 aa
MILPRSIRKFRDKRAMADSRWAHLFDAYEGDEVVSLDCETTSLDVGKASILSIGAVKIKG
KRVKTSDRLDIRLKPPTDLNGDSIKIHKIRAADLADGVDIREALEQVLEFVGNRPILGYY
VNYDIRMLDKFLRQEFDFSLPNKAIELSHVYHDIIKWKHVGGDVDLRFDTIASKLDMPII
QRHTALGDAITVALMYVRLKHGDSPLDVN
NT seq 630 nt   +upstreamnt  +downstreamnt
atgattttgccccgcagtattcgtaagtttcgcgataagcgcgccatggctgatagccgt
tgggcgcacctttttgatgcttacgagggtgatgaggtcgtctcgctggattgtgaaacg
accagtctcgatgtgggtaaggcgtcgatcctctctattggtgcggtgaagattaaaggt
aagcgcgttaagactagtgatcgtcttgatattcgtcttaaaccgcccacggacctcaat
ggtgactcgattaagattcacaaaattcgcgcagcagacctggctgatggtgtggatatt
cgtgaagccttagagcaggtgttggagtttgtgggaaaccgtccaattcttggttactac
gtcaattacgatatccgtatgctggataagttcttgcgtcaggagtttgacttcagtctg
ccaaataaagcgattgagttgtctcacgtctatcatgacattattaagtggaagcatgtg
ggtggagatgttgaccttcgcttcgatactattgcgagcaaattggatatgccgattatc
cagaggcacaccgcattaggtgatgcaatcactgtggctcttatgtatgtgcggctgaaa
catggtgactcacccttggatgttaattga

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