Marinobacterium sp. LSUCC0821: HH196_08300
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Entry
HH196_08300 CDS
T08388
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
marl
Marinobacterium sp. LSUCC0821
Pathway
marl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
marl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HH196_08300 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marl03400
]
HH196_08300 (xth)
Enzymes [BR:
marl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HH196_08300 (xth)
DNA repair and recombination proteins [BR:
marl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HH196_08300 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QJD71690
UniProt:
A0A858R093
LinkDB
All DBs
Position
complement(1719641..1720414)
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AA seq
257 aa
AA seq
DB search
MRVITFNCQGIKNAAENGFFEWMAKQDADVVCLQNIKAREYQLDAEIYHPEGYEAYFFEA
FDDDYSGVAIYTRHLPKAVMTGLGFEQCDTQGRFIQADFDRFSVASFSVPSGLSGEDAQL
AKEQYLENFAGHFDKTLRKRREFIFAGTLNIAHKPVDLSNWYINQTVSGFLPEEREWAEE
LFVEKGFVDAMRECNKSERQYTWWPDYNRARELNEGARLDYQITTAGLRKTIQNAGVYKA
ERFSDHAPLIVDYDLDF
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtgatcacctttaactgccaaggcattaaaaacgcggctgaaaatggcttcttc
gagtggatggccaagcaggacgcggatgttgtttgtctccagaatatcaaagcgcgcgag
tatcagcttgacgctgaaatttaccatcctgaaggttacgaagcttacttttttgaagct
tttgatgatgactacagtggtgtcgctatctacacacgccatctgcctaaggctgtcatg
acaggtcttggatttgagcagtgtgatacacagggtcgttttattcaggccgattttgac
cgtttcagtgttgccagcttctccgtaccttctggtttgagtggtgaagacgcgcagttg
gctaaagagcagtacctagagaacttcgcaggccatttcgacaagactcttcgtaagcgt
cgtgaattcatcttcgcgggtacgcttaatattgcacacaagccagtcgaccttagcaac
tggtacatcaaccaaaccgtttctggtttcctacctgaagagcgtgagtgggcagaagag
ctctttgttgagaagggttttgttgacgcgatgcgtgagtgcaataaatctgaacgccaa
tacacttggtggcccgattacaatcgcgctcgtgagcttaatgaaggtgcgcgactagac
taccagattacaactgcaggtctgcgtaagacgattcaaaatgccggtgtttacaaggcc
gagcgattctcagaccatgcgccgctgattgtcgattacgatctcgacttttaa
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