Marinobacterium sp. LSUCC0821: HH196_08845
Help
Entry
HH196_08845 CDS
T08388
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
marl
Marinobacterium sp. LSUCC0821
Pathway
marl03030
DNA replication
marl03410
Base excision repair
marl03420
Nucleotide excision repair
marl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HH196_08845 (polA)
03410 Base excision repair
HH196_08845 (polA)
03420 Nucleotide excision repair
HH196_08845 (polA)
03440 Homologous recombination
HH196_08845 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marl03032
]
HH196_08845 (polA)
03400 DNA repair and recombination proteins [BR:
marl03400
]
HH196_08845 (polA)
Enzymes [BR:
marl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HH196_08845 (polA)
DNA replication proteins [BR:
marl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HH196_08845 (polA)
DNA repair and recombination proteins [BR:
marl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HH196_08845 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HH196_08845 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QJD71789
UniProt:
A0A858QZD6
LinkDB
All DBs
Position
complement(1818116..1820875)
Genome browser
AA seq
919 aa
AA seq
DB search
MADASAPVVLVDGSSYLYRAYFASERANLRTSDGRPTGAIRLLTSMMRSLLKSYPDSPVA
VIFDAKGKTFRDEIYPEYKAQRPPMPDDLRLQVEPVHDIIKAMGIPLFVEEGVEADDVIG
TLARQAEQHNLNVVISTGDKDMAQLVDDKVTLINTMTETTMDPQGVVDKFGIPPELIIDF
LALMGDKVDNIPGVPGVGEKTALGLLQGIGSIKSIYENLDKVATLEFRGAKTMAAKLEEH
REAAELSYLLATIKTDVELHISLNDITKPAPDNTALIELFKSFEFRSWATLLEGAPEGSS
ETAVVESAAPATTKVVVERRYETILTQADAERWFNTLRAAGTFAFDTETTSLNYMEAQLV
GVSFCCEAGVAAYLPLGHDYVGAPAQVDFGWALDQLKSLLEDASLKKVGQHLKYDMNVLA
RYGIDVKGIGSDTMLESYVLNSTATRHDMDSLANFYLGESTTSFESLAGKGKNQLTFNQI
EIEPAGEYAAEDADITWRLHELLQANLKDVAPLAKVLNEIEIPLIPVLSRIERNGALVDA
AMLGQQSLELEARLKVLEAEAFEAAGEPFNLASPKQLQAILFEKQGLPVIKKTPKGAPST
AEEVLQELALEYPLPKLIMEHRGLTKLKSTYTDKLPLMIDKGTGRIHTSYHQAVTATGRL
SSTDPNLQNIPVRTAEGRRIRHAFVAPQGYKVVAADYSQIELRIMAHLSGDAGLVNAFAA
GDDIHRATAAEVFKVTPLEVTNDQRRSAKAINFGLIYGMSAFGLAKQLGTTRGEAASYIE
HYFATYPGVQNYMERTREQARDAGFVETVFGRRLYLPDIEARNPMLRQAAERTAINAPMQ
GTAADIIKLAMLAVDQWLNESGFDARMIMQVHDELVFEVAEGQVEQFKLEIIRLMEGAAK
LDVPLVVEVGVGENWEQAH
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgcatctgctcctgtagtcctcgttgacggctcttcatatctttaccgtgct
tacttcgcttcagagcgtgcaaatttgcgtacctctgatggccgacctacgggtgctatc
cgtcttctaacctcgatgatgcgaagcttattaaagagctatcctgactctccagttgcg
gtcatcttcgatgccaagggtaaaaccttccgtgatgagatctatccagagtacaaagca
cagcgcccacctatgcctgacgatcttagactacaggtggagccagtacatgacatcatt
aaagctatgggtattcctctttttgttgaggagggcgttgaagctgatgatgttatcggt
actctagcgcgtcaggctgaacagcataacctcaatgtagttatctctaccggtgacaaa
gatatggcgcagttggtggatgataaggtgacgctcatcaacaccatgactgaaacaacc
atggaccctcagggtgttgtcgataaattcggtatcccaccagaactcatcatcgatttc
ctagcgctgatgggtgataaggtcgataacattcccggagtgcctggcgttggtgaaaag
actgctctgggtctgctgcagggtatcggtagcattaagtcgatctatgagaatttggat
aaggttgcgacgctcgagtttcgtggcgccaaaacgatggcggctaaacttgaagagcac
cgtgaagcagcggagctctcttacttattggcaacgatcaaaaccgatgtcgaactgcat
atttcactgaacgacatcaccaaacctgcaccagataatactgcgttgattgaactcttc
aaaagcttcgaattccgctcatgggcgactcttttagagggtgctcctgagggctcgtct
gaaactgcagtagtcgaatcagcagcaccagcaacaactaaagtggtggttgagcgtcgt
tacgagacgattcttactcaagcggatgcggagcgttggtttaatacgctgcgtgctgcg
gggacttttgcgtttgatactgagacaaccagtctgaactacatggaagctcagttggtc
ggtgtttctttttgttgtgaagcgggcgtggccgcttaccttccgcttggacatgactat
gtaggtgccccagcccaggtcgacttcggttgggcgttggatcaattaaaatcactgctt
gaagatgcgtcactgaagaaagtgggacagcatcttaagtacgacatgaatgttttggcg
cgttacggaatcgacgttaaaggcataggtagtgacaccatgctggagtcttatgtactc
aacagcacggcgacgcgtcatgatatggatagccttgcgaatttctatctaggtgagtca
accactagctttgagtctctagcgggcaagggtaaaaaccagctcactttcaatcagatc
gagattgaacctgctggcgagtatgctgcagaagatgccgatattacttggcgtttgcac
gagctgctacaagcgaatctgaaagatgtcgcaccgcttgctaaggtgttaaacgagatt
gaaattccactgattcctgtcttgtcacgaatcgagcgcaacggtgctttggtggatgcg
gcaatgctagggcagcagagtcttgagttagaagctcgtcttaaagtgctggaggcagag
gcgtttgaagcggcgggtgagccgtttaacctcgcatctccgaaacagcttcaggcgatt
ctgtttgagaaacagggcctgcccgtgatcaagaagacaccgaaaggggccccttcaaca
gctgaagaggttctgcaggagctggcgcttgagtacccacttccaaagttgattatggaa
caccgtggtctgacgaagctaaagtcgacctacaccgacaagttaccgttgatgattgat
aagggcacgggccgcattcacacctcataccatcaggcagtgaccgcgacgggtcgtcta
tcctctaccgaccctaacttgcagaatattccagtgcgtaccgcggaagggcgccggatt
cgccatgcgtttgttgcacctcagggctacaaagtggtggcagccgactactcgcaaatt
gaacttcgcattatggcgcatctatcaggcgatgccggtttagtgaacgcttttgcagcg
ggtgacgatattcaccgcgcaacggccgcagaggttttcaaagtgacccctctggaggtt
acaaatgatcagcgtcgcagtgcaaaggcgatcaacttcggtctcatctacggcatgtct
gcctttggtttggcgaaacaacttgggacaacacgtggtgaagctgctagctacatcgaa
cactactttgcgacctatcccggcgtgcaaaactatatggaacgcacgcgcgagcaagct
cgtgatgcaggttttgtagagactgtgtttggccgtcgtttgtaccttccagatatcgaa
gcgcgtaatccaatgttacgccaagcggccgaacgtaccgctattaacgccccgatgcag
gggacggctgcagacattatcaagttggccatgctggccgttgatcaatggctcaatgag
agcggtttcgatgcacgcatgattatgcaggtgcacgatgagttggtatttgaggtggca
gaagggcaggttgagcagtttaagctagagatcattcgattgatggagggcgctgctaag
cttgatgtgcctttggttgtcgaagtgggtgtcggtgaaaattgggaacaggctcactaa
DBGET
integrated database retrieval system