Marinobacterium sp. LSUCC0821: HH196_09560
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Entry
HH196_09560 CDS
T08388
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
marl
Marinobacterium sp. LSUCC0821
Pathway
marl00300
Lysine biosynthesis
marl00470
D-Amino acid metabolism
marl01100
Metabolic pathways
marl01110
Biosynthesis of secondary metabolites
marl01120
Microbial metabolism in diverse environments
marl01230
Biosynthesis of amino acids
Module
marl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
marl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HH196_09560 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HH196_09560 (dapF)
Enzymes [BR:
marl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HH196_09560 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QJD71922
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All DBs
Position
1971365..1972198
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AA seq
277 aa
AA seq
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MLLRFTKMHGLGNDFMVIDAISQKVRMRPDLVKELADRNFGIGFDQMLLVEPPTEPTMDF
RYRIYNADGSEVEHCGNGARCFARFVRDKGLILRDEMQVETARGRAILSIKGRDQVEVDM
GAPELRPLEVPTTYAEQATTYTTQLADGTEVEFGAVSMGNPHAVLVVDSVANAPVESWGP
ELESHSVFPNRANIGFMEVISPSEVRLRVYERGAGETQACGTGACAAVVSGRLRGLLDQR
VTVHLPGGDLEIEWAGEGHSVMMTGPVATVYEGQIYL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgcgcttcacaaagatgcacggtttaggcaacgactttatggtgatcgatgcg
atctctcaaaaagtgcgtatgcgtcctgatcttgtcaaagagctggctgatcgaaacttc
ggcattggctttgatcagatgttgctagtcgagccacccactgagccaactatggatttc
cgctaccgcatctacaatgctgacggtagtgaggtagagcactgtggtaatggtgcacgc
tgctttgctcgctttgtgcgtgacaagggactaatcctgcgcgatgagatgcaggtggag
accgcacgcggcagagcgatcttgtctattaagggccgagatcaggttgaagttgatatg
ggggctccagagcttcgcccactcgaagtacctacgacatatgcagagcaggcaactacc
tacacgactcaattagcagatggtacagaagttgagtttggtgctgtctcgatgggtaac
ccgcacgccgtattggttgttgattcggttgcgaatgcgccagttgagagctggggccct
gaattagagtcacactcagtatttccaaaccgcgccaatatcgggtttatggaagtgata
tcacctagcgaggttcgactacgcgtatacgagcgcggtgcgggtgagacgcaggcttgt
ggtacaggagcctgtgctgcagtagtttcaggtcgtttgcgtggacttctagatcagcgt
gtcactgtgcatttgccaggtggcgatttagagatcgaatgggctggcgaaggtcactcc
gtgatgatgacaggtcccgtagcaaccgtttatgaagggcagatctacctatga
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