Marinobacterium sp. LSUCC0821: HH196_10560
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Entry
HH196_10560 CDS
T08388
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
marl
Marinobacterium sp. LSUCC0821
Pathway
marl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
marl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HH196_10560 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marl03400
]
HH196_10560 (nfo)
Enzymes [BR:
marl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
HH196_10560 (nfo)
DNA repair and recombination proteins [BR:
marl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HH196_10560 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QJD72110
UniProt:
A0A858R1H2
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All DBs
Position
2165490..2166374
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AA seq
294 aa
AA seq
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MQAVNRKDKPYYVGAHVSAAGGVENAPLNAAAIGANAFAVFTKNQRQWVSKPLTSESISA
FKANCEKHGFLPEQILPHDSYLINLGHPEQEPLQKSRDAFIDEMQRCEQLGLCYLNFHPG
SHLKKIDESACLARIAESIDIATAESDSVIAVIETTAGQGTNLGYKFDEIAAILDHSKNP
DRIGVCIDTCHIFAAGYDLRTAEACEASFGDFERLVGFDKLCGMHINDAKVKLGSRVDRH
HSLGQGEIGWEAFRYIMQDDRFRGVPLCLETIDETIWAEEIQQLRQFAGEAIRA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctgtaaatcgaaaagataagccctactacgttggtgctcatgtcagcgctgcg
ggtggggttgagaacgctcccttaaacgcagcggcgattggtgctaatgcgtttgcggta
ttcacaaaaaaccagcgccaatgggtttcgaagccgctgaccagtgaaagtatttcggcg
tttaaagcgaactgtgaaaagcacggctttttgccagaacagatcctccctcacgatagt
taccttatcaatttaggacacccagaacaggagccgctgcagaagtcgcgcgatgccttt
attgatgagatgcagcgttgtgagcagttggggctctgttacctcaattttcatccaggt
agccaccttaaaaagatcgatgagtcggcctgtttggctcgtattgcagagtcgatcgat
atcgctaccgctgagagcgactctgttattgctgtgatcgaaacgacagcgggtcagggt
acgaatctgggctacaagttcgatgagattgcagcgattcttgatcactctaaaaatcct
gatcgtatcggtgtatgtatcgatacctgtcacatctttgctgctggctatgacctgcgt
acagcagaggcctgtgaggctagttttggtgattttgagcggctagttgggttcgataaa
ctctgtggtatgcacatcaatgacgctaaagtgaagctaggttcacgtgttgatcgtcac
cactcgctagggcagggtgagattggctgggaggcttttcgctacataatgcaggatgat
cgttttcgtggagtgcctctctgtcttgagacgattgatgagacgatttgggctgaagaa
attcagcagttacgtcaatttgcaggtgaggcgattcgggcctaa
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