Marinobacterium sp. LSUCC0821: HH196_10670
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Entry
HH196_10670 CDS
T08388
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
marl
Marinobacterium sp. LSUCC0821
Brite
KEGG Orthology (KO) [BR:
marl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
marl03016
]
HH196_10670 (truB)
Enzymes [BR:
marl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HH196_10670 (truB)
Transfer RNA biogenesis [BR:
marl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HH196_10670 (truB)
Prokaryotic type
HH196_10670 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QJD72127
UniProt:
A0A858R0X1
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All DBs
Position
2189359..2190312
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AA seq
317 aa
AA seq
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MARRKKGRRIDGVFLLDKPQGLTSNSALQRVKRLYDAAKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYITTAKLGVRTDSSDADGEVVETKPVPSLEWDSLNQLIQARFAGEI
EQVPSMFSALKHNGQPLYKLARKGEKVEVKPRQVNIYEIKLLDLRDDEVDLEVHCSKGTY
IRSIVEDLGLELGCGAHVSMLRRIGVANYDAAKLLTMDELEQIAAETETDQGPECIQMRL
DALLLPPWSAVDSLPSIELPADLAVRLLQGQRITELFDERGLVRLFAEQRFLGMGEVEDT
GRLVARRLLDTSEGAQA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggctcgacgtaaaaaagggcgccgcatcgacggcgtctttttgttagataagccgcaa
ggtctaacatcaaattccgcgcttcaacgggttaagcgactttatgatgctgcaaaagca
ggtcataccggcgcgcttgatccacttgcgacaggcatgcttcccatctgtttaggtgaa
gcgaccaagttttcacagttcctgctagactctgataagcgctacatcacgacggctaaa
cttggtgtacgtaccgacagtagtgatgctgatggtgaagtcgttgagactaaacctgta
ccaagccttgagtgggattcattgaatcagcttattcaggcacgctttgctggtgaaatt
gagcaggtgccatcgatgttctcggccctgaagcataatggtcagcctctctataaactt
gctcgcaagggtgaaaaagttgaggtgaagccgcgtcaggtaaacatctatgagatcaaa
ttgctcgatcttcgtgacgatgaagttgatcttgaagtgcactgttctaaagggacctac
attcgttcaatcgtagaagatttggggttagagcttgggtgtggtgcgcacgtcagtatg
cttcgccgaatcggtgttgccaactacgatgctgcgaaattgcttaccatggacgagtta
gagcaaatagcggctgaaactgagacagatcaaggtccagagtgcatacaaatgcgttta
gatgcgttattattgccgccctggagtgcagtggactcattgccttcgatagaattgcct
gctgatttagcagtacgactcttacagggccagcgaatcaccgaacttttcgatgaacgc
ggcctggttagactctttgctgaacagcgcttcctaggtatgggagaggttgaagataca
ggtcgcttagtggctcgtagacttctagatacctccgaaggtgcccaggcttag
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