Maribacter sp. 1_2014MBL_MicDiv: YQ22_10460
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Entry
YQ22_10460 CDS
T04570
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
marm
Maribacter sp. 1_2014MBL_MicDiv
Pathway
marm03030
DNA replication
marm03430
Mismatch repair
marm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YQ22_10460
03430 Mismatch repair
YQ22_10460
03440 Homologous recombination
YQ22_10460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marm03032
]
YQ22_10460
03400 DNA repair and recombination proteins [BR:
marm03400
]
YQ22_10460
Enzymes [BR:
marm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YQ22_10460
DNA replication proteins [BR:
marm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YQ22_10460
DNA repair and recombination proteins [BR:
marm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YQ22_10460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
APA64703
LinkDB
All DBs
Position
complement(2496427..2500863)
Genome browser
AA seq
1478 aa
AA seq
DB search
MYLIFDTETTGLPKNWNAPITDTDNWPRCIQIAWQLHDEMGNCIEHQDYLVRPDGFNIPY
DAEQIHGISTELAEQQGVSLAEVLEKFNIAMSKTKFIVGQNVGFDVNIMGAEFHRLGVEN
PLQELPVLDTCTEHTAQLCQIPGGRGGKFKLPTLTELHEFLFGEPFGEAHNATADVEATT
RCFLELIRKQQYTKEQLDVQPDYFKNFSEANPQEIQLIGLKHINLKKASKKIADALWEKD
TGGVSQEEIQENLATLENASFAHLHNHTQFSILQSTISVPDLVAAAAKAKMPAVAMTDHA
NMMGAFHFVNGVLNHNKGVVSRNEANQKRYEATQNGTLEEGQEPLNELPEPEQEITPIIG
CEFQVCEDHTNKSQKDNGYQIVMLAKSKKGYLNLAKMSSIAFVDGKYYVPRIDKKIVEQY
KEDVMVLTGNLYGEVPSKVLNVGENQAEEALLWWKETFGDDLYIEIMRHGQEDEDRVNQV
LIQFAKKHNVKLVATNNTYYAEKENAHAHDILLCVKDGEKQSTPIGRGRGYRYGLPNQEY
YFKSSDEMKELFKDIPEAIINIQEIIDKVETFTLARDVLLPAFDIPEEFQFEEDKLDGGK
RGENKFLRHITYEGAKKRYGEITPEIDERLDFELKVIEKTGYPGYFLIVEDFIRAARQMD
VSVGPGRGSAAGSAVAYCLWITNLDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRSRVM
DYVIDKYGSNQVAQIITYGTMAAKSSIRDTARALDLPLGDADRMAKLIPNMSKLKKIIGI
DEKVLRSKFNSEELEKINELLNISEGDGLESETLNQAYVLEGSVRNTGIHACGVIITPDD
ITKFVPVALAKDSEMYCTQFDNSVVESAGLLKMDFLGLKTLTLIKDTVKIVKAKHGVELD
PENFPLDDEKTYELFQRGETVGVFQYESPGMQKHMRSLKPTVFADLIAMNALYRPGPMEY
IPSFIARKHGTEEIVYDLDACEEYLAETYGITVYQEQVMLLSQKLADFTKGEADVLRKAM
GKKQKHVLDKMKPKFIEQASAKGHAVDKLEKIWKDWEAFAAYAFNKSHSTCYAWIAYQTA
YCKAHYPAEYMAAVLSNNMNDIKQVTFFMEECKRMGLDVLGPDVNESYYKFAVNDAGAVR
FGMGAVKGVGRGAVETIVENRKDVGPYKSVFDFAKRIDLRAANKKAFENLAVAGGFDSFG
TTHRAQYFHDEGDGITFLEKVIKYGAKYQENENSSQVSLFGDASEVQIPEPVVPPCEEWG
TMEKLRREKEVVGIYISGHPLDDFKTEIKAFCNANVGCVNDLPTYVNRELTFAGVITDVQ
HRVSKNGKGWAAFTMEDYTDSFEFRIFGEEYLKFRHFLMINSFAYVKLYVRDGWTNKDTG
KKGDPRMQFNSFMLLQEVMETYARKLTIKLNIAELKEDKVRALKDTFDNHKGDHAINFIV
YEMEEKIKVNLNSRRQKVQISSELLQLLEQQDVHFKLN
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atgtaccttatttttgataccgaaaccaccggtcttccaaaaaattggaatgcccctatt
actgacacggacaattggccccgttgtatacagatcgcttggcagttgcatgatgaaatg
ggtaattgtattgaacatcaagattatttggtgcgcccagacggattcaacataccctat
gatgctgaacagatccacggtatttctacagaacttgccgagcaacaaggtgtatctctt
gcagaggttttagagaaattcaacattgctatgtccaaaacaaaattcattgttgggcaa
aatgttggattcgacgtgaatatcatgggggcggaatttcaccgtttaggtgttgaaaat
ccgttacaagaacttcctgttttagatacttgtacagaacacactgcacaactatgccaa
atacccggtggtcgtggtggtaagttcaaattacccacattgacagaactgcatgagttt
ttgtttggcgaaccatttggcgaagcccacaatgcaactgccgatgttgaagctaccaca
cgttgttttctagaacttatacgaaagcaacaatataccaaagaacaattagacgttcaa
cccgattatttcaagaatttctccgaagctaatccgcaagaaattcaactcattggtctt
aagcatatcaaccttaaaaaagcatcgaaaaaaattgccgatgccctatgggaaaaagat
acgggcggagtttcacaagaagaaatacaggaaaaccttgcgacattagaaaatgcaagt
tttgcacatttacataaccatacgcaattctctattctacagtccaccattagtgttcct
gatctagtagccgccgcggccaaggcaaaaatgccggcagtagctatgacggaccatgca
aatatgatgggcgcatttcatttcgtcaacggcgtactcaatcataataaaggagtagta
tccaggaatgaagccaaccaaaagcgctatgaggctacccaaaacggaacgctggaagaa
ggtcaagaacctttaaatgagttgcccgaaccagaacaggagatcacacctataattggt
tgtgaatttcaagtatgtgaagaccataccaacaaatctcaaaaagacaacggataccaa
atagtcatgcttgccaaaagcaaaaaaggatatctaaatttggcaaaaatgtcttcaata
gcctttgtagacggtaaatactacgtaccacgtattgataagaaaattgttgagcagtac
aaggaagacgtcatggtacttaccggtaacttatatggtgaagttccaagtaaagtattg
aacgttggtgaaaaccaagctgaagaggcattactttggtggaaagaaacctttggcgat
gatctctacatagaaattatgcgccatgggcaagaagatgaagaccgtgtgaaccaagtt
ttaatacagttcgcaaaaaagcacaatgttaagctcgttgctaccaataacacgtattat
gcagagaaagaaaatgcccatgcgcatgatattcttttatgtgtaaaagatggggaaaaa
caatcaactcccataggtcgtggtcgtggttaccgctacggtttacccaaccaagaatac
tactttaaatcatctgatgagatgaaggagctttttaaggatattcctgaagccatcatc
aatattcaagaaattatagacaaggtagaaacctttactcttgcacgtgacgtactgtta
cctgcttttgatattccagaagagtttcaattcgaagaagataaattagacggaggcaaa
cgtggtgagaacaaatttctaagacacatcacctatgaaggcgccaaaaaaagatatggg
gagattacgcccgaaattgatgaacgtttagactttgaactcaaggtaattgaaaagacc
ggctacccgggttatttcttgatcgtggaagatttcataagggcggcaaggcaaatggat
gtatccgttggtccgggtcgtggatcggctgcgggatctgctgttgcctattgcttatgg
attacgaatttagaccctattaagtacgatttactttttgagcgtttcctaaatccggat
cgtgtaagtatgcccgatatcgatattgactttgatgacgaagggcgaagtcgggttatg
gactatgtaattgacaagtatggatctaaccaggtggcacagattattacctatggtacc
atggccgcgaaatcatctattcgagatacggcaagagcgcttgatttacctttaggtgat
gcggaccgtatggcgaagttgatcccgaacatgtccaagctgaaaaaaattatcggcatt
gatgaaaaggtactccgaagcaaattcaacagtgaagaactcgaaaaaataaacgagctt
ttgaacatttccgaaggcgacggattagaatctgaaaccttaaaccaagcgtacgtattg
gaaggctctgtacgtaacaccggtattcatgcctgtggggttatcattacaccagatgat
ataaccaagtttgtacccgtggcgcttgccaaagattcggaaatgtactgtacccaattt
gacaactcggtagtggaaagcgcagggttgttgaaaatggatttcttgggactaaaaacg
ctgaccttaattaaggataccgttaaaatcgtaaaagccaaacatggtgttgagctagac
cctgagaattttccgctggatgatgaaaaaacctatgagcttttccaacgaggtgaaacg
gtaggtgtattccaatatgaatctcccggaatgcagaagcacatgagatccctaaaacca
acggtttttgccgatcttattgccatgaacgccttgtaccgtcctggtcctatggaatac
ataccaagtttcattgcccgtaaacacggtaccgaagaaattgtatatgaccttgacgct
tgtgaagaatacctagcggaaacttatggtattacagtttaccaagagcaagtgatgctt
ctatcgcaaaagttggcagactttactaaaggtgaagccgatgtactgcgtaaggcaatg
ggtaaaaaacagaagcacgtactagataaaatgaagccaaagttcattgaacaagcttca
gcaaaaggacatgccgtagataaattggaaaaaatttggaaagactgggaagcgtttgca
gcctatgcctttaacaaatcgcactccacttgctatgcctggattgcctaccaaaccgca
tattgtaaagcccactaccctgccgaatatatggcggcagtactgagcaacaacatgaac
gatattaaacaggttacatttttcatggaagaatgtaagcgcatgggtctagatgtactt
ggaccagatgtaaacgaatcttactacaaatttgccgtaaacgatgccggtgcggttcgt
tttggtatgggagcggtaaaaggcgttggtcgtggtgccgttgaaactatagttgaaaac
agaaaagatgtaggtccttataaatctgtattcgattttgccaaacgaatagacctacgt
gcagccaataaaaaggcatttgagaaccttgccgttgcaggtggcttcgattcttttggt
actacacatagggcacaatattttcatgatgaaggtgacggtattacatttcttgaaaaa
gtcattaaatacggtgccaagtatcaagaaaacgaaaactcttcacaagtaagccttttt
ggtgacgccagtgaagtacaaataccagaacccgttgtaccaccttgcgaagaatgggga
accatggaaaaactccgtcgagaaaaagaagtggtaggtatctatatatccggacaccct
ttggacgattttaaaacggaaatcaaagctttttgtaacgcaaatgtgggctgcgtaaac
gatttacccacgtatgtaaacagagaacttacgtttgcaggagtcattacagatgtacag
catagggtttctaaaaacggtaaaggctgggctgcgtttaccatggaagattatacggac
tcttttgaatttagaatatttggtgaggaatacctgaaattcagacatttcttaatgatc
aattccttcgcgtatgtaaaactctatgtacgagatggatggacaaataaggatacggga
aagaaaggagatccaagaatgcaattcaatagctttatgttattacaagaagtcatggaa
acctatgccagaaaactgaccataaaacttaatattgccgaattaaaagaagataaagtc
agggccttaaaagacacctttgacaatcataaaggagaccatgccattaattttattgtc
tacgaaatggaagaaaaaattaaggtgaatttgaacagtagaagacaaaaagtgcagatt
tcgagcgaattattacaacttttagagcaacaagacgttcattttaagctcaactaa
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