Maribacter sp. 1_2014MBL_MicDiv: YQ22_10915
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Entry
YQ22_10915 CDS
T04570
Name
(GenBank) RNA polymerase sigma54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
marm
Maribacter sp. 1_2014MBL_MicDiv
Pathway
marm02020
Two-component system
marm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
marm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YQ22_10915
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
YQ22_10915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marm03021
]
YQ22_10915
Transcription machinery [BR:
marm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
YQ22_10915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
AbiTii
HTH_IclR
SF3b1
MarR
Pup
Motif
Other DBs
NCBI-ProteinID:
APA64783
LinkDB
All DBs
Position
complement(2605007..2606464)
Genome browser
AA seq
485 aa
AA seq
DB search
MLKQHLQFKLSQKLSPQQIQLMKLIQLPTQAFEQRLKQELEENPALETGKEDLDNVVDEY
DDVYDDNADSETINTEDINIDDYLSDDEIPDYRTKANNYSSDDEEKSVPYAAGISFNQHL
INQLNTVYLSDEEWNIAEFLVGSVDESGYIRRPISDIMDDLAFTQNVYTDEETITRILSI
VQELDPPGVGARTLEECLIIQLERKDVTPSIELATEILKKSFEHFTKKHYQKLIQKHNIT
ETELKDAIGEIEKLNPKPGGSYSGNNRIVEHVVPDFAIRITEGELELTLNGRNAPELHVS
REYSNMLKGYKEAKDKSKSQKDTVMFIKQKLDAAKWFIDAIRQRQQTLFITMNAIMQYQK
EYFLTGDERNLRPMILKDIADEIGMDVSTVSRVANSKYVDTPYGTKLIKEYFSESMKNEQ
GEDVSTREIKKILETVIQNETKKKPLTDDKLAAILKEKGYPIARRTVAKYREQLNIPVAR
MRKEI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaacaacatctacaatttaaattatcccaaaaattatctcctcaacagattcag
ttgatgaagttaattcagttgcctacacaggcgtttgaacaacgacttaaacaagaatta
gaggagaacccggcactagagaccggtaaggaagatttagataacgttgttgatgagtat
gatgatgtttatgatgacaatgccgatagcgaaaccatcaacactgaggacatcaatata
gatgattacttaagtgacgatgaaatcccggattacagaaccaaagctaataattacagt
tctgatgatgaagaaaaaagtgtaccctacgcagccggaatatccttcaatcagcattta
ataaatcaattgaatactgtttacctttctgatgaagaatggaacatcgcagagttttta
gtaggtagtgtagatgaaagcggttatataagaagacctatttccgatatcatggacgac
ttggcttttacccaaaatgtttatactgacgaagaaaccattaccagaatattatctatt
gtacaagagttagacccaccaggtgtaggtgcacgtactttagaggagtgtttaataata
cagttagagcgaaaagatgtcactccaagtattgaacttgcaacagagatcttaaaaaag
tcttttgaacacttcacaaagaaacactatcaaaaattaattcaaaaacacaatatcacc
gaaacggaattgaaggatgccatcggtgaaatagaaaaattaaaccctaaaccaggtgga
tcctattccggaaataatagaatagttgaacatgtagttccggattttgcaataagaata
accgagggagaactagagcttacccttaatggtagaaatgctccagaattacatgtgtct
agagaatacagcaatatgctaaaaggctataaagaagccaaggacaaatctaaatctcaa
aaggacacggttatgttcataaagcagaaattagatgccgcaaagtggtttatagacgct
ataagacaacgacaacaaaccctattcatcactatgaacgccatcatgcagtatcaaaaa
gaatacttcctgactggagatgaacgtaatttaagaccaatgatccttaaggatattgca
gatgaaataggaatggatgtttctacggtttctagggttgccaatagtaaatatgtagat
actccttacggtaccaagttaattaaagaatacttctcagaatctatgaaaaacgaacaa
ggagaagatgtttctacacgggaaatcaagaaaattttagaaacggttattcaaaacgaa
accaaaaagaaaccgcttaccgatgataaattagcggctattttaaaagaaaaaggttac
cccatagctagaagaaccgttgccaagtatagagagcaattgaatattcctgttgcacgc
atgagaaaagaaatctaa
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