Maribacter sp. 1_2014MBL_MicDiv: YQ22_10980
Help
Entry
YQ22_10980 CDS
T04570
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
marm
Maribacter sp. 1_2014MBL_MicDiv
Pathway
marm03030
DNA replication
marm03410
Base excision repair
marm03420
Nucleotide excision repair
marm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YQ22_10980
03410 Base excision repair
YQ22_10980
03420 Nucleotide excision repair
YQ22_10980
03440 Homologous recombination
YQ22_10980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marm03032
]
YQ22_10980
03400 DNA repair and recombination proteins [BR:
marm03400
]
YQ22_10980
Enzymes [BR:
marm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YQ22_10980
DNA replication proteins [BR:
marm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
YQ22_10980
DNA repair and recombination proteins [BR:
marm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
YQ22_10980
NER (nucleotide excision repair)
GGR (global genome repair) factors
YQ22_10980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
DNA_pol_lambd_f
HHH_5
zf-LYAR
Motif
Other DBs
NCBI-ProteinID:
APA64795
LinkDB
All DBs
Position
complement(2621000..2623834)
Genome browser
AA seq
944 aa
AA seq
DB search
MADQKRLFLLDAYALIFRGYYALIKNPRINSQGMDTSAIMGFMNSLFDVIRREKPDHLAV
CFDKGGSVERTEMFAEYKANRDETPDAIRIAVPYIQDILKAMHIPCVVLEGWEADDIIGT
LSKQAEKEDYKVFMVTPDKDFGQLVSENIFMYRPARMGNGIEIWGIPEIQKRFGVERPEQ
VIDYLGMMGDASDNIPGLPGVGDKTAKKFIAQFGSMENLLANTDQLKGKMKEKVEANKEL
GILSKKLATICIDCDVTFNAKDYELSVPDFEKVQEIFEKLEFRRLKDQFIKIFSEETEET
VTQVTSTATAKKEKQDAGSGQFSLFGGSADTGATVKDFSSRKTIADVAHSYQSVAPGMAM
KLFLKNLMQQTSVCFDTETTGLDPLTAELVGIAFSWEATKGFYIPFTDNKEEAQALLEEL
RPFFEAEEIEKIGQNLKYDIKVLDKYNIDVKGPLFDTMLAHYLINPDMRHNMDVLAETYL
NYTPVSITELIGKKGKNQLSMRNVPLEKQTEYAVEDADITFQLAQHFRPELKEANTEKLF
QDIEIPLLRVLADMELEGINLDKEFLNSLSEDLNNDISNLEKKIYEVAGEEFNIGSPKQL
GEILFDKLKLVDKPKKTKTGQYSTAEDVLSFLAKDHEIVQNVLDYRGLAKLKSTYVDALP
EQVEPSTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFVPRDENYTLLAA
DYSQIELRIIAALSEETTMIEAFKHGEDIHASTASKVFNVPLDEVTREQRSNAKTVNFGI
IYGVSAFGLSNQTDLSRKEAKELIDTYYKTYPKLRNYMSEQVDFARENGYVSTVLGRRRY
LKDINGSNAIVRGAAERNAVNAPIQGSAADIIKIAMINIHKKLEKGNYKSKMLLQVHDEL
VFDIYKPELEELQTLIKSEMENAYKIAVPLDVEVGLGDNWLVAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaaaaaagactctttttgctagatgcatacgcacttatatttcgtggttac
tatgcgcttataaaaaacccaagaataaactcgcaaggcatggacacctctgccattatg
ggtttcatgaattccttattcgatgttattcgccgtgaaaaacccgatcatttagccgtt
tgcttcgataaaggcggcagtgtggaaagaactgagatgtttgccgaatataaggcaaac
agagatgaaaccccagatgccattaggatagcggtaccctatatacaagatatacttaag
gcaatgcacataccttgtgtggttttggaaggctgggaagcagatgacattataggcaca
ttatccaaacaagctgaaaaggaagactacaaagtatttatggtcaccccagataaggac
tttgggcaattggtttctgaaaacatatttatgtaccgccctgccagaatgggtaacggt
attgaaatttggggaattccagaaattcaaaaacgctttggtgtagaaagaccggagcag
gtaatagattacttaggtatgatgggcgatgccagtgataacatacccggattaccaggt
gtgggagataaaactgcaaaaaaattcattgcccaatttggatctatggaaaatctattg
gcaaataccgatcagttgaaaggtaagatgaaggagaaagtagaagcaaacaaagaattg
ggtatactttctaaaaaattagccaccatatgcattgattgcgacgttactttcaacgct
aaggactatgaactttcagtaccggattttgagaaggtacaagagatatttgaaaaattg
gaatttagaaggttaaaggatcaattcattaaaatattctcggaagaaacagaagaaacc
gttacacaggttaccagcacagcaactgctaaaaaagaaaaacaagatgcggggtcaggg
caattctccttatttgggggttctgcagataccggagcaaccgtaaaagacttttctagt
agaaaaaccattgcagatgtagcacactcataccaaagtgtagctcctggtatggcaatg
aagcttttcttaaaaaatttaatgcagcaaacttcagtatgttttgataccgaaactaca
ggtttagacccgttgaccgctgaattggtaggaattgctttctcttgggaagcaaccaaa
ggtttttacattccttttacggataacaaagaagaagcacaggctcttttagaagagcta
cgccctttctttgaagctgaagaaattgaaaaaataggtcagaatttaaagtatgatatt
aaggtattggataaatacaatattgatgtcaaaggacctttattcgataccatgttggcc
cactatctaattaatccggatatgcgtcataatatggatgttctggcagagacctattta
aattacactccagtatccattactgaacttattggcaaaaaaggcaagaatcaattgagt
atgcgcaatgttccgttagaaaaacaaacggaatatgcagtagaagatgcggatattacc
tttcaacttgcacaacattttagaccagaactaaaagaggcaaatacagaaaaattattt
caagatattgagattcccctactacgtgtactagcggatatggagctagaaggaatcaat
ttagacaaggaattcttgaattcactctccgaagacttgaataacgacatttctaacctt
gagaagaaaatttatgaagttgccggtgaagaatttaatatagggtctccaaagcaatta
ggtgaaatattatttgacaaactaaaactggtagacaaacctaaaaaaaccaaaacaggt
caatattctaccgcggaagatgtattatcctttttggctaaagaccatgaaattgtacaa
aatgtattggattacagaggtcttgccaaattaaaaagcacctatgtagatgcattgcca
gaacaggttgagccttctacaggaagagtgcataccgattatatgcaaaccgttgcagca
accggaaggttaagtagcaacaaccctaatttacaaaacattccaattagaacagagcgc
ggaagacaagtaagaaaagcttttgtgccaagagatgagaactacacgttattagcggca
gattattcacaaatagaattacgtataattgcagccttgagtgaagagactaccatgata
gaggctttcaaacatggagaggatattcatgcttctacagcatctaaggtatttaatgta
ccattggatgaagttacacgagaacaacgtagcaatgccaagacggtaaactttggtatc
atctatggcgtatctgcatttggattaagtaaccaaacggacctatcaaggaaagaagca
aaagaattaatagacacctactacaagacttatccaaagctaagaaactacatgagcgag
caggtagattttgcacgtgaaaacggttatgtctcaacggtgttgggcagaagaagatac
cttaaggatataaacggcagtaatgcaatagtacgtggtgctgcggaacgaaatgccgta
aacgcacctattcaaggtagtgcggcagatatcattaaaattgccatgatcaacattcat
aaaaagttagaaaaaggcaattacaaatctaaaatgttactgcaagtacatgatgaattg
gtattcgatatctacaaaccagaattagaggaattgcaaacactgattaaatcagaaatg
gaaaatgcatacaaaatagcagttcctttagatgttgaagttggcttaggtgataattgg
ttggtagcccattaa
DBGET
integrated database retrieval system
