Maribacter sp. 1_2014MBL_MicDiv: YQ22_16000
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Entry
YQ22_16000 CDS
T04570
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
marm
Maribacter sp. 1_2014MBL_MicDiv
Pathway
marm03420
Nucleotide excision repair
marm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
marm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
YQ22_16000
03430 Mismatch repair
YQ22_16000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marm03400
]
YQ22_16000
Enzymes [BR:
marm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YQ22_16000
DNA repair and recombination proteins [BR:
marm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
YQ22_16000
MMR (mismatch excision repair)
Other MMR factors
YQ22_16000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
APA65685
LinkDB
All DBs
Position
3813304..3815631
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AA seq
775 aa
AA seq
DB search
MSSFIDELNDAQKAPVLHKDGPLMVIAGAGSGKTRVLTYRIAYLMAQGVDSFNILALTFT
NKAAREMKERIAHIVGASEAKNLWMGTFHSVFAKLLRIDGDKLGYPANFTIYDTQDSQRL
IASIIKEMGLDKDIYKYKQIQNRISSFKNSLITVKAYRNDPDLVEQDAMAKKPRTGDIYE
NYVDRCFKAGAMDFDDLLLRTNELLTRYPDVLMKYQNRFRYILVDEYQDTNHSQYLIVKA
LADRFQNICVVGDDAQSIYSFRGANISNILNFQKDYDNVGMYRLEQNYRSTRNIVNAANS
IIGKNQNQIEKVVWTDNDDGPSIKIHRSTTDAEEGRFVANSIWEHRMQQQMTNGQFCVLY
RTNSQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDVLSYLRLVINPKDEEALKRVINFP
ARGIGGTTLDKLVVAANHYNRSIFEVMENIDRIDLKINSGTKRKLQDFVTMIKSFQAMNE
TTDAFALSEHVAKKTGILLEFKKDGTPEGIGKMENIEELLNGIKDFVEGQQEIDEATGSI
SEFLEDVALATDLDNDTGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSGMSMNTRSE
LEEERRLFYVALTRAEKQAYLTYTQNRYRWGKLIDAEPSRFLEEIDEKYVENLTPVDGGY
RYKSLINADIFGEVDKSKLRQQKPVRGTPPSISQPNSGQLKKLRKIKPQLSEPVGNTNKI
DPDLQEGSLINHTRFGRGKVVKIEGAGNDRKAEIMFDKGDIKKLLLRFAKLEVIG
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
ttgagctcatttatagatgaattgaacgatgcccaaaaagctcctgttttgcacaaagac
ggacctttaatggtaattgccggggcagggtctggaaaaacacgagtattaacgtataga
attgcgtatctaatggcgcaaggtgtagattcctttaacattttggcgttgacctttacc
aataaagcggcacgtgagatgaaagaacgtattgcgcatattgttggtgccagtgaagct
aaaaacttatggatgggtacctttcactcggtttttgcaaagttattgcgtatagatgga
gacaagttgggttacccagccaactttacaatttatgacacacaagattcccaaaggcta
attgcctctatcatcaaggaaatgggacttgataaggatatctacaagtataagcagatt
caaaatagaatttcatcatttaaaaatagtttgatcacggttaaggcctaccgaaatgac
ccagatcttgttgaacaagatgctatggccaaaaagccaagaactggagatatttatgag
aattatgttgaccgttgctttaaggccggggcaatggattttgatgatctcttattacga
accaatgaactcttgacacgttacccagatgtgttgatgaaatatcagaatagatttaga
tatattttggtagatgagtatcaggataccaaccattcacagtacttgatcgtaaaagca
ttggcagatcgttttcagaatatatgtgtggtaggagatgatgcacaaagtatatattct
tttagaggtgcgaacatcagcaacattctgaactttcaaaaagattatgataatgtaggt
atgtatcgcctagagcagaattaccgttctaccagaaatatcgtaaatgcggccaattcc
atcatcggaaaaaaccaaaatcaaattgagaaagtggtttggacagataatgatgatgga
ccttcaattaaaattcatagaagtaccaccgatgctgaagaaggtagatttgtagcaaat
tctatttgggaacatagaatgcagcaacaaatgacaaatggtcaattttgtgtattatat
agaacaaactcccaatctagggcaattgaagatgccttgcgtaaaagagatattccatat
cgtatttatggcggactgtcattctaccaacgtaaagagatcaaggatgttttgtcatat
ttacgtttggtcatcaacccaaaagatgaagaagctttaaaaagagtaatcaattttcca
gcaaggggtattggtggtacaacattggataaattggtggtagccgccaatcattacaat
cgttccatttttgaggtcatggagaatattgatagaattgatttaaaaattaattctggt
accaaacgaaagctacaggactttgtaaccatgatcaaaagttttcaggcaatgaacgaa
actaccgatgcttttgcattgtctgaacatgttgccaagaaaacaggtattcttttggag
tttaaaaaggatggaactccagagggtattggtaaaatggagaacattgaagaactttta
aacggtattaaggattttgttgaagggcaacaggaaattgatgaagctaccggtagtatt
agtgagtttttagaggatgtagctttggctactgatttggacaatgatactggtgatgac
gatagggttgccttaatgaccattcacttggcaaaaggattggaattcccttacgtatac
attgttggtatggaagaagatctttttccttcaggaatgagtatgaataccagaagcgaa
ttagaagaagaaagaagattgttctatgttgctttgaccagggcagagaaacaggcatat
cttacatatacgcaaaatagatatcgttggggtaagttgatcgatgccgaacctagtagg
tttttggaagaaatagatgaaaaatatgttgagaaccttactcccgtagatggtggctat
cgttataaatcattgattaatgcagatattttcggtgaagtagataaaagtaagttacga
caacaaaaaccggttaggggaactccgccatctataagtcaaccaaattctggtcaactt
aaaaagctgcgtaaaattaaaccgcaattatcagaaccggtaggtaataccaataagata
gaccctgatttacaagaaggttctctaatcaatcatactcgtttcgggcgaggtaaagtg
gtgaagattgaaggtgccggaaacgatagaaaggcagagataatgttcgataaaggtgat
attaagaaactactgcttcgtttcgcaaagttagaagtgatcggatag
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