Marinitoga sp. 1137: LN42_00405
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Entry
LN42_00405 CDS
T04633
Name
(GenBank) tRNA pseudouridine synthase ACD
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
marn
Marinitoga sp. 1137
Brite
KEGG Orthology (KO) [BR:
marn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
marn03016
]
LN42_00405
Enzymes [BR:
marn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LN42_00405
Transfer RNA biogenesis [BR:
marn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LN42_00405
Prokaryotic type
LN42_00405
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DNA_meth_N
Motif
Other DBs
NCBI-ProteinID:
APT75030
LinkDB
All DBs
Position
77120..77854
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AA seq
244 aa
AA seq
DB search
MRVAAIVAYDGTKFNGFQGQPKVRTVQGEFEKVLKRIFKQKVISWGAGRTDTGVHGYGQV
IAFDVPNERMTLENIKDALNANLPEDIYVRKVLKVRDKFSPRHEATKRIYHYFIYQNDEP
NIFLRDRVWWFPYDLNIEKMRKAAKYLEGEHDFTTFKTGNDDRNPVRTIYRIRILKMRNN
IILIRVEGHSFLRRMVRNIVGALVKVGTENWEPEYIKEILEAKSRSKAPASAPPQGLYFY
SVLF
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagagtagcagcaatagtagcgtatgacggaacaaaattcaatggatttcaaggacaa
ccaaaagtaagaacagttcaaggagaatttgaaaaagttttaaaaagaatatttaaacaa
aaagtaatttcatggggagcaggaagaacagatacaggtgttcatggatatggacaggtt
atagcttttgatgttccaaatgaaagaatgacacttgaaaatataaaagatgctttaaat
gcaaatctaccagaagatatatatgttagaaaagttcttaaagtaagagataaattttct
ccaaggcatgaagcaacaaaaagaatatatcattattttatatatcaaaatgatgaacca
aacatctttttaagagatagagtttggtggtttccatatgatttaaatattgaaaaaatg
agaaaagctgcaaaatatcttgaaggagaacatgattttacgacatttaaaactggaaac
gatgatagaaatccagtaagaacaatatatagaataagaattttaaaaatgagaaataat
attatattaataagggtagaaggccattcgttcttaagaagaatggtcaggaatatagta
ggagcacttgtaaaggtagggacagaaaattgggaaccagaatatataaaagagatatta
gaggccaaaagcaggtcaaaggcaccggcttcagcaccaccacaaggattatacttttat
tcagtattattttaa
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