Marinitoga sp. 1137: LN42_00710
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Entry
LN42_00710 CDS
T04633
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
marn
Marinitoga sp. 1137
Pathway
marn03030
DNA replication
marn03410
Base excision repair
marn03420
Nucleotide excision repair
marn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LN42_00710
03410 Base excision repair
LN42_00710
03420 Nucleotide excision repair
LN42_00710
03440 Homologous recombination
LN42_00710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marn03032
]
LN42_00710
03400 DNA repair and recombination proteins [BR:
marn03400
]
LN42_00710
Enzymes [BR:
marn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LN42_00710
DNA replication proteins [BR:
marn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LN42_00710
DNA repair and recombination proteins [BR:
marn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LN42_00710
NER (nucleotide excision repair)
GGR (global genome repair) factors
LN42_00710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
TMCCDC2
HHH_2
Motif
Other DBs
NCBI-ProteinID:
APT75077
LinkDB
All DBs
Position
123633..126317
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AA seq
894 aa
AA seq
DB search
MSNLYLIDGSGVAYRAFFALDQELQTSTGIPTNAIYGVTKMLIKILKKYIKTNEDAVIFV
MDKKTVTYRHKLLEQYKANRPETPKIFKEQIPYILEMVNALGIKTIAEEGVEADDVIATL
ALKGKEKFKNIYILSSDKDLMQLIDEKIKMLRIGRGITDLIEYDIEKVKERYGFEPKKIQ
DFLALTGDTADNIPGVKGIGEKTATKLIKEYGTLEEIYKNVRNTTKSIQKKLTEGKDMAF
LSKKLVQLITDVELDINWEDYIYRGYTEELEKLLNEFEFKSIIRELGLKEEKKVIVSPEI
PEFEDLSKKGKYHLISPDKIDEIISKIKDANPVSFDLETTAVDPYRAEILGIALSTEPGT
GYYIDISKLEKKEKLEILKKIWLILKEKDLIGQNLKYDLSIMKVNGFEIKNPYFDTMIAA
YLVSPDSRRFNMDDLAKKYLDYETIKYDDIVKKDTLFANTLKDVDPEKVAEYSGEDADIT
LRLFYVLKPRIYEFQLEKVMEEIENPLIPVLAKMELNGVFFDIPYLKELEKEYKNITKNI
LNEIQEIAGYSVNPNSPKQIRELLFEKLGIKPKKKTKGGQYSTNAQVLEELKNEHPVIKL
ILEYRKYQKLLSTYIQAIPKLVNPVTGRVHTSFNQTGAATGRLSSSDPNLQNLPIREVEG
EKIRKAVKAEKENYVLMSADYSQIELRVLAHMSQDPILIDSFNKNLDIHKITAAKLFDVP
EENVDNKMRQIGKMINFSIIYGVSSYGLAERTGISIEEAGIFIKKYFELYKNVEKYQKEI
LSNLNKNGYVETLFGRKRFLSKLNLNKNDLRRIAVNTPIQGTASDIMKLAMIKLDKVLPE
YAKMILQVHDEIVIELPEDRIEEVSLIVKETMENAVKLDVPLKVDIAVSERWSK
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatttatatcttatagatggaagcggagtagcatatagagcattttttgcattg
gatcaggaattgcaaacatcaacaggaattccaactaatgcaatctatggtgttaccaaa
atgcttataaaaatcttaaaaaaatatataaaaacaaatgaagatgcagttattttcgta
atggataaaaaaactgtaacctataggcacaaattattagaacagtataaagctaacaga
cctgaaacacctaaaatattcaaagaacaaataccttatatacttgaaatggttaatgca
cttggaataaagacaattgctgaagaaggtgttgaggcagatgatgttatagcaacattg
gctttaaaaggaaaggaaaaatttaaaaatatttatattctttcttccgataaagattta
atgcagttaatagatgagaaaataaaaatgttaagaattggcagaggtattaccgattta
atagaatatgatatagaaaaagttaaagagagatatggatttgaacctaaaaaaattcaa
gattttcttgcattaactggagacactgcggataatattcctggtgtaaaaggaattgga
gaaaaaacggctacaaagcttataaaagagtatgggactcttgaagaaatatataaaaat
gttagaaatacaactaaatccatacagaaaaaattaacagaaggaaaagatatggcattt
ttaagtaaaaaattggttcaattaattacagatgttgagttggatataaattgggaagat
tatatatataggggttatacagaggaacttgagaaattattaaatgaatttgaatttaaa
tcaataattagagaattaggattaaaggaagaaaaaaaagtaatagtctcacctgaaatc
ccggaatttgaagatctatctaaaaagggaaaatatcatttaataagtcctgataaaatc
gatgaaataatatcgaaaataaaggatgcaaatcctgtatcatttgatttagagacaacc
gcagtagatccgtatcgtgcagaaattcttggtatagctttatctacagaaccagggaca
gggtattacatcgatatatcaaaacttgaaaaaaaagaaaaacttgaaatattaaaaaaa
atatggttaattctcaaagaaaaagatttaattggacaaaatcttaaatacgatttgtca
ataatgaaggttaatgggtttgagataaagaatccttattttgatacaatgattgctgca
tatcttgtttctccagattctcgacgattcaatatggatgatttagctaaaaaatatctc
gattatgaaacaataaaatatgatgatatagtaaaaaaagataccttatttgccaataca
ttaaaagatgtagatcctgaaaaggttgcggaatattcaggtgaagatgcagatataact
ttacgtcttttttatgtattaaaacctcgaatctatgaatttcaacttgaaaaggtaatg
gaagaaatagaaaatcccctaattcctgttctagccaaaatggaattaaatggagttttc
tttgatattccatatttgaaagagcttgaaaaagagtataaaaatattaccaaaaatatt
ttaaatgaaattcaggaaattgcaggatatagtgttaatccaaattctccaaaacaaatc
cgtgaattgttatttgaaaaacttggaataaagccgaaaaagaaaacaaaaggcggtcaa
tattcaacaaatgcacaggttctggaagagttgaaaaatgaacatcctgtaattaagctt
atattagaatatagaaaataccaaaagcttttatcaacatatattcaagcaataccaaaa
ttagtaaatccagtaacgggaagagttcatacatcatttaatcaaacaggggcagccacg
ggaagattaagcagcagtgatccaaatctacaaaatctaccaattagagaagtggaaggg
gaaaagataagaaaagctgtcaaagctgaaaaagaaaattatgttttaatgagtgcggat
tactctcaaatagaattacgtgttttagctcatatgagtcaggatccaattttaatagat
tcattcaataaaaaccttgatattcataaaattacagcagcgaaattgtttgatgttcct
gaagaaaatgttgataataaaatgaggcaaattggaaaaatgataaacttttctataata
tatggtgtttcctcatatggtttagctgaaagaacagggatttctatagaagaagcagga
atattcataaaaaagtattttgagctatataaaaatgtagaaaaatatcagaaagaaata
ttatccaatttaaataaaaatggatatgtcgaaacattatttggaagaaaaagattttta
agtaagttgaatcttaacaaaaatgatttaagaagaattgcagtaaatactccaattcaa
ggaacagcgtcagatattatgaaattggcaatgataaaattagataaagttttgccagaa
tatgctaagatgattcttcaggttcatgatgaaattgtaatagaattacctgaagatagg
attgaagaagttagtttaattgtaaaggaaactatggaaaatgctgttaagttagatgtg
cctctaaaagtggatattgcagtatccgaaaggtggtcaaagtga
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