Marinitoga sp. 1137: LN42_04705
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Entry
LN42_04705 CDS
T04633
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
marn
Marinitoga sp. 1137
Pathway
marn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
marn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LN42_04705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marn03021
]
LN42_04705
03400 DNA repair and recombination proteins [BR:
marn03400
]
LN42_04705
Enzymes [BR:
marn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LN42_04705
Transcription machinery [BR:
marn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LN42_04705
DNA repair and recombination proteins [BR:
marn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LN42_04705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
RNA_pol_A_CTD
HHH_5
HHH_XRCC3_RpoA
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
APT75753
LinkDB
All DBs
Position
complement(924649..925698)
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AA seq
349 aa
AA seq
DB search
MEFVKPEKMILETLEESEELEYKYGRFVLSPLERGYAVTIGNALRRVLLSSIPGLAITSI
RIPGKLHEFDVIEGVQEDILEITVNLKKVELKVVDFDNIGNLKEPIVLRIEKMGPAEIKA
GDIITPPGIEIANPDFKIATMNANKKFEMELYATVGKGFVSTSEMDLSKDIEMIYIDGVY
SPVIRVNYLTEKVRVGKRTDYDKLILEVWTKKSIDPKEALVKATKILIEHFNIIYSSWRE
EIDLTEAEAIPESMETNVSEEIAGQEVEEEFKNVSLEVLETRIDELDLSKRAKNCLKREK
INTVRDILKKDPDELMKIKNFGKKSLDEIRKELKEKFQLDYDEIQKGGA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgtaaaaccggaaaagatgatattagaaacattagaagaatcagaagaatta
gaatacaaatatggaagatttgtcctgtcgcctcttgaaagaggatatgcggttaccata
ggtaacgcattaagaagagtattattatcctcaataccagggcttgcaataacaagcata
agaattcctggtaaattacacgaatttgatgtaattgaaggcgtacaggaagatatactt
gaaataacagttaaccttaaaaaagttgaattaaaagttgtagattttgataacattgga
aatttaaaagaaccaatagttttaagaatagaaaaaatgggaccagcagaaattaaagca
ggagacataattacaccaccaggtattgaaattgcaaatcctgattttaaaattgcaaca
atgaatgcaaacaaaaaatttgaaatggaattatatgcaacagtaggaaaaggatttgta
tcaacatcagaaatggatctttcaaaggacattgaaatgatttatatagatggtgtatat
agtcctgtaattagagttaattatctcacagaaaaagttcgtgttggaaaaagaacagac
tatgataaattaatacttgaagtatggacaaaaaaatctatagatccgaaagaagcattg
gtaaaagccacaaaaatattaattgaacactttaatataatctactcatcatggagagaa
gagatagatttaacagaagctgaagctattccagaatcaatggaaacaaatgtttcagaa
gaaattgctggtcaggaagtagaagaagaatttaaaaatgtaagtcttgaagttcttgaa
acaagaatagacgagctcgatttaagcaaaagagcaaaaaattgtttaaagagagaaaaa
atcaatacagtaagagacatattaaagaaggatccagatgaattaatgaaaatcaaaaac
ttcggtaaaaaatctttagatgaaattagaaaggaattaaaagagaaattccagttggat
tatgacgagatccagaagggaggagcctaa
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