KEGG   Marinitoga sp. 1137: LN42_05170
Entry
LN42_05170        CDS       T04633                                 
Name
(GenBank) integration host factor
  KO
K03530  DNA-binding protein HU-beta
Organism
marn  Marinitoga sp. 1137
Brite
KEGG Orthology (KO) [BR:marn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:marn03032]
    LN42_05170
   03036 Chromosome and associated proteins [BR:marn03036]
    LN42_05170
   03400 DNA repair and recombination proteins [BR:marn03400]
    LN42_05170
DNA replication proteins [BR:marn03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    LN42_05170
Chromosome and associated proteins [BR:marn03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    LN42_05170
DNA repair and recombination proteins [BR:marn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      LN42_05170
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1 COMMD9_HN
Other DBs
NCBI-ProteinID: APT75834
LinkDB
Position
complement(1001802..1002074)
AA seq 90 aa
MNKKELVSALAEKLSVTKKEAALFVDSFVDVVSEALSKGDNVKIVGFGTFEVVERKPRKG
VNPQTKETIEIPGGKVPKFKAGKELKAKVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaaaaggaactcgttagtgcattagctgaaaaattatccgttacaaagaaagaa
gcagctttatttgttgattcatttgtagacgttgtgtcagaagctttatcaaaaggcgac
aacgtaaaaatcgttggattcggtacttttgaagttgtagaaagaaaaccaagaaaaggt
gttaacccacaaacaaaggaaactattgaaattcctggtggaaaagtacctaaattcaaa
gctggtaaagaattaaaagcaaaagtaaaataa

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