Marinitoga sp. 1137: LN42_05170
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Entry
LN42_05170 CDS
T04633
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
marn
Marinitoga sp. 1137
Brite
KEGG Orthology (KO) [BR:
marn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marn03032
]
LN42_05170
03036 Chromosome and associated proteins [BR:
marn03036
]
LN42_05170
03400 DNA repair and recombination proteins [BR:
marn03400
]
LN42_05170
DNA replication proteins [BR:
marn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LN42_05170
Chromosome and associated proteins [BR:
marn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LN42_05170
DNA repair and recombination proteins [BR:
marn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LN42_05170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
COMMD9_HN
Motif
Other DBs
NCBI-ProteinID:
APT75834
LinkDB
All DBs
Position
complement(1001802..1002074)
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AA seq
90 aa
AA seq
DB search
MNKKELVSALAEKLSVTKKEAALFVDSFVDVVSEALSKGDNVKIVGFGTFEVVERKPRKG
VNPQTKETIEIPGGKVPKFKAGKELKAKVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaggaactcgttagtgcattagctgaaaaattatccgttacaaagaaagaa
gcagctttatttgttgattcatttgtagacgttgtgtcagaagctttatcaaaaggcgac
aacgtaaaaatcgttggattcggtacttttgaagttgtagaaagaaaaccaagaaaaggt
gttaacccacaaacaaaggaaactattgaaattcctggtggaaaagtacctaaattcaaa
gctggtaaagaattaaaagcaaaagtaaaataa
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