Marinitoga sp. 1137: LN42_05190
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Entry
LN42_05190 CDS
T04633
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
marn
Marinitoga sp. 1137
Pathway
marn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
marn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LN42_05190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marn03400
]
LN42_05190
Enzymes [BR:
marn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LN42_05190
DNA repair and recombination proteins [BR:
marn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LN42_05190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
APT75836
LinkDB
All DBs
Position
complement(1003959..1004627)
Genome browser
AA seq
222 aa
AA seq
DB search
MGKMEDMDIISEKIKKCKGCSLSLSRNNVVVGEGSLDTPIMFVGEGPGANEDLQGRPFVG
RAGNLLDKLLKEVAKINREDLYITNVVKCRPPKNRVPTGEEMEKCSHFLLAQVMTIKPKI
IVALGSTALNYFLKQTVPITKHRGRFKEWYGDIYIFPTFHPSYLLRNRSEKEGSPLFYAK
IDMQAIGYMYKQLKNNPDLDIKKLVTTVEKGVIAAENKINKG
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaatggaagatatggatataattagcgaaaaaataaaaaaatgtaaagggtgt
tctttaagtttatcaagaaataatgtagtagtaggtgaagggagtttagatacacctata
atgtttgttggtgaaggtcctggtgcaaatgaagatttacagggaagaccatttgtagga
agagcagggaatttacttgataaattgttaaaagaagtggcaaagataaatagagaagat
ttatatattaccaatgtggtaaaatgtaggccacctaaaaacagagtgcccacaggcgaa
gaaatggaaaaatgcagtcattttctccttgcgcaggttatgacaataaaaccaaaaatt
atagttgcgttaggttctacagcattaaattattttttgaagcaaacagttcccattaca
aaacatagaggaagattcaaagaatggtatggcgatatatatatattcccaacatttcac
ccaagctatcttcttagaaataggagtgaaaaagaaggatctccattgttttatgcaaaa
attgatatgcaggcgataggttatatgtacaaacagttgaaaaataatccagatttagat
ataaaaaagctggtaacaacggttgaaaaaggcgtaattgcagcagaaaataaaataaac
aaaggatga
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