Marinitoga sp. 1137: LN42_05795
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Entry
LN42_05795 CDS
T04633
Name
(GenBank) phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
marn
Marinitoga sp. 1137
Brite
KEGG Orthology (KO) [BR:
marn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marn03019
]
LN42_05795
Messenger RNA biogenesis [BR:
marn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LN42_05795
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
HDOD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
APT75946
LinkDB
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Position
1151137..1152177
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AA seq
346 aa
AA seq
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MKNTGGISLGDMLKEKGQLSDDIINTSYISDLKVNDVKDVEGKVLSKRLQTTKDGKEFLL
FTLGDKTGTLRAIDWFNASKNNEKINIGDIIRLRGKIVVFDSRLQLNVDKDSEIKILKED
EIDPEKFIKSSSKDVEYLKNELYAIIDSIKDIDIKNLLTYMFIKDKKFIKQFFDSPAAIS
VHHAYKHGLLEHTVDVAKLCISISENYIDIVQKDILIAGALLHDIGKIREYKITPAGIEK
TDEGELIGHIALGTNMVIEAAKKVNNMPSEKLEQILHMIVSHHGELEWGSPIVPKTIEAF
ILHFADNLSSKVEQVRNHIEESNNKDWTDYNKNLGRKIKITKMEDK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacactggcggtataagtttaggagatatgttaaaagaaaaagggcaattatca
gacgatattataaacacttcatatatttcagatttaaaggttaatgatgtaaaagatgtt
gaaggaaaggttttaagcaaacgccttcaaacaacaaaggatggaaaggaatttttgctt
tttactctgggagataaaacaggaacattaagagctattgattggttcaatgcctcaaaa
aacaatgaaaaaataaatattggagacattatcagattaagaggtaaaatagttgtattt
gatagtagattgcaattaaatgttgataaagacagtgaaataaaaatcttaaaagaagac
gaaatagaccctgaaaagtttatcaagagcagctctaaagatgtggaatacctaaaaaat
gaattatatgcaattattgattccattaaggatatagatatcaaaaacctgctgacatat
atgtttatcaaggataaaaaattcattaagcaattttttgattcacctgcagctattagc
gttcatcatgcgtataaacacggattacttgaacacacagtagatgtcgcaaaattatgt
atttcaatctctgaaaattatatagatattgtccagaaggacattcttattgcaggagcg
ttattacatgatattggaaaaataagagaatacaaaataacccctgctggtatagagaaa
acagatgaaggcgagttaataggacatattgcactgggaacaaatatggttatagaagct
gcaaaaaaagttaacaatatgccttctgaaaaacttgaacagatactacatatgattgtt
tcacatcatggagaactcgaatggggtagtccaatagttcccaaaacaatagaagcattt
atattacattttgctgataatttaagttctaaagtagagcaggttagaaatcatattgaa
gaatccaataacaaagattggacagattataacaaaaatcttggccgaaagataaaaata
acaaaaatggaggacaaataa
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