Marinitoga sp. 1137: LN42_09260
Help
Entry
LN42_09260 CDS
T04633
Name
(GenBank) RNA-binding protein S4
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
marn
Marinitoga sp. 1137
Brite
KEGG Orthology (KO) [BR:
marn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
marn03009
]
LN42_09260
Enzymes [BR:
marn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
LN42_09260
Ribosome biogenesis [BR:
marn03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LN42_09260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
APT76541
LinkDB
All DBs
Position
complement(1877196..1877873)
Genome browser
AA seq
225 aa
AA seq
DB search
MERLDKFLANAKVGTRSEVKKIIKAGVVKVNGKTIKKPEFKVSENDEITVNNKKIIPHKN
IYIIINKPKGYLSATYDKKDKYVLQLINHPYKNELKIAGRLDKDAHGLLILTNDGEYIHK
IISPKKDIYKTYEVIVKGEITEEKLEKLKKGIKLKDFTTKPAIIEKVENQKITIKISEGK
FHQVKRMMKAVGLEVIDLKRIAIGNITLPENLNDGEWIELINNKI
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggagagattggataaattccttgcaaatgcaaaggttggaacacgttctgaagtaaaa
aaaattattaaagccggtgttgtaaaagtaaacggtaaaacaataaaaaagcccgaattt
aaagtctcagaaaacgatgaaataacggtcaataacaaaaaaataataccacacaaaaac
atttatattataattaacaaaccaaaaggctacctttcagcaacatacgataaaaaagac
aaatacgtccttcaattaataaaccacccatataaaaatgaattaaaaatagcaggaaga
cttgataaagatgcacatggtctattaatacttaccaatgacggtgaatatatacataaa
attatttctcccaaaaaagacatttacaaaacctatgaagtaatagtaaaaggagagatt
actgaagaaaaattggaaaaattaaaaaaaggaatcaaattaaaggattttaccacaaaa
cctgcaataatagaaaaggtagaaaaccaaaaaattacaattaaaatctccgaaggaaaa
tttcatcaggtaaaacgtatgatgaaagctgttgggcttgaagtaattgatctcaaaaga
attgctataggaaatataaccttaccagaaaacttaaatgatggagaatggatagaactt
attaataataagatataa
DBGET
integrated database retrieval system
