Methanobrevibacter arboriphilus: MarbSA_03050
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Entry
MarbSA_03050 CDS
T07510
Name
(GenBank) RNA-binding protein
KO
K12589
exosome complex component RRP42
Organism
maro
Methanobrevibacter arboriphilus
Pathway
maro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MarbSA_03050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maro03019
]
MarbSA_03050
Messenger RNA biogenesis [BR:
maro03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MarbSA_03050
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
MarbSA_03050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
BBL61265
LinkDB
All DBs
Position
complement(370966..371760)
Genome browser
AA seq
264 aa
AA seq
DB search
MNIIPEITRECITDLINNNKREDGRDLEEYRDILIETGVISKAEGSARVKIGNSQVIVGI
KPQIGEPFPDTPNVGVLMTNGEMLPMADPTFEPGPPSETSVELARVVDRGIRESEMVDLE
KLCIVPGKKVWMLFIDLHIIDFDGNLFDTATLAVMSALLNTKLPVAKIVDDEVVIDKEST
TNLPLRDKEAMCTFVKIGEKMVLDPSLDEEAILDARLSIGITESGSICAMQKGGDHPLTK
EDILGAVKTAYSKVPDLLEKVNNA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaatattatacctgaaattacaagagaatgtattactgatctaattaataataacaaa
agagaagatgggagagatcttgaggaatacagagatattcttatcgaaacaggagttata
tctaaagcagaaggctctgcaagggttaaaattggtaatagtcaagtcattgttggtata
aagcctcaaataggtgaaccatttccagatactcctaatgtaggagttttaatgacaaat
ggtgaaatgttacctatggctgatccgacttttgaaccaggtcctccaagtgaaacatca
gttgaacttgctcgtgttgtagacagaggaattcgtgaaagtgaaatggtagatcttgaa
aaattgtgtattgtgcctggtaaaaaagtatggatgcttttcattgatttacatataatt
gattttgatggaaatctctttgatactgctacattagctgtaatgagtgctcttttgaat
actaaattacctgtagctaaaattgttgatgatgaagttgtaattgataaagaatctaca
actaatttgcctttaagggataaagaagctatgtgtactttcgttaaaataggagaaaaa
atggttttagatccttctttagatgaagaagcaattttagatgctagactatcaattggt
ataactgaatctggtagtatttgtgctatgcaaaaaggtggagatcatccattaactaaa
gaagatattttaggggctgttaaaacagcttattctaaggtacctgatttattagaaaaa
gttaataatgcttaa
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