Methanobrevibacter arboriphilus: MarbSA_03060
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Entry
MarbSA_03060 CDS
T07510
Name
(GenBank) exosome complex exonuclease Rrp41
KO
K11600
exosome complex component RRP41
Organism
maro
Methanobrevibacter arboriphilus
Pathway
maro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MarbSA_03060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maro03019
]
MarbSA_03060
Messenger RNA biogenesis [BR:
maro03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MarbSA_03060
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
MarbSA_03060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
BBL61266
LinkDB
All DBs
Position
complement(371781..372500)
Genome browser
AA seq
239 aa
AA seq
DB search
MILITNNSKRDDGRAYDEIRPLKIEAGVLERADGSAYLEVGGNKVLVAVYGPRESYIRRL
LKPNTGVIRCRYNMAPFSVDDRKRPGPDRRSTEISKITAEALRPALMLEGFPRSMVDIFI
EIIEAEGGTRCAGITAASVALADAGIPMKDLVVGCAAGKVNDEIVLDLSEKEDKEGQADV
PIAMMPRTEEITLLQSDGDLSEEEFGKALDLAMEGCRQVNKVQIEALKTRYAQDAGSDS
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgattcttatcactaataatagtaaaagggatgatgggcgagcatatgatgaaatccgt
cctttaaaaattgaagcaggagtacttgaaagagcagatggatctgcttatttggaagtt
ggtggaaataaggtattggtggctgtttatggtccacgtgaatcttatatccgaagatta
ttgaaacctaacacaggtgttattaggtgcagatataatatggcacctttttcagttgat
gataggaaaagaccaggacctgatagaaggtcaacagaaatatcaaaaataactgctgaa
gcactcagaccagctttaatgctagaaggatttccaagatctatggttgatattttcata
gaaattattgaggctgaaggtggaactaggtgtgcaggtattactgctgcttctgttgct
ttagctgatgctggaattcctatgaaagatttagtagttggttgtgctgcaggtaaagtc
aatgatgaaattgtattggatttatctgaaaaagaagataaagaaggtcaagctgatgtt
cctatagctatgatgccaagaactgaggaaattacattactgcagagtgatggtgactta
tctgaggaagaatttggaaaggcacttgatttagctatggaaggatgtagacaagtgaat
aaagttcaaattgaagctcttaaaacaaggtatgctcaagatgctggatctgatagttaa
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