Marivirga arenosa: QYS47_20240
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Entry
QYS47_20240 CDS
T10278
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
marp Marivirga arenosa
Pathway
marp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QYS47_20240 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marp03019
]
QYS47_20240 (recQ)
03400 DNA repair and recombination proteins [BR:
marp03400
]
QYS47_20240 (recQ)
Enzymes [BR:
marp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QYS47_20240 (recQ)
Messenger RNA biogenesis [BR:
marp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QYS47_20240 (recQ)
DNA repair and recombination proteins [BR:
marp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QYS47_20240 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ-1-like_HTH
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
WNB17372
UniProt:
A0AA51ZV85
LinkDB
All DBs
Position
3279991..3282168
Genome browser
AA seq
725 aa
AA seq
DB search
MIEEQEATLKQKLKEVFGYNQFRGNQELIMQNIIKGHNTFVIMPTGAGKSLCYQLPAIAQ
EGTALVVSPLIALMKNQVDTLVALGVNAAFLNSTLTKTETKRVKKEVMSGDLKLLYVAPE
SLTKEENVEFLKQANISFAAIDEAHCISEWGHDFRPEYRKIKSILQQISNIPIIALTATA
TPKVQLDIQKNLNMEEANVFKSSFNRENLYYEVRPKNQAKKQLIRFLNERKGKCGVIYCL
SRKKVEEIAEFLNVNGFNAAPYHAGLESGARMKNQDDFLNEDVDIIVATIAFGMGIDKPD
VRFVIHYDTPKSVEGYYQETGRAGRDGLVGDCLMFYSYNDILKLEKFNKDKPVTEKENAK
LLLEEMSSYAESSVCRRKQLLHYFGEEFGDYCGKCDNCLHPKEKFEAKEEMITVLKTVKL
TKERFGINHLVNVIRGSNDQYVTSYGHNELEVHGVGSDKDLEFWKSVIRQTMLYGYLEKD
IENIGVLKLNDAGKKFLEAPTDIQFTVNHVYTDDGDEDQIEKETVSANSFDETLFSQLKA
LRKKVAKSKNLPPYVIFQDPSLEEMATTYPTTQDELAAVNGVGLGKVRKFGKPFMELIKE
YVDENDIITAADVMVKSSVNKSKMKIFIIQQVDKKIDLEEIAEMKDISFEELIDEIELIC
YSGTTLNLDYYLNQIIDDEKQEEIMDYFLSSESDSIDDAMDEFEDEFSEEDLRLMRIKFL
STYAN
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagagcaagaagctactttaaaacaaaaattaaaagaggtatttggatataat
caattcagaggaaatcaggaattgattatgcaaaatataataaaaggccataatactttt
gttattatgcctacaggagcaggtaaatccctttgttatcaattacctgccattgcccaa
gaaggaacagcattagtggtttcacccctgattgccctaatgaaaaaccaagttgacact
ttggtagccttaggtgtgaatgcggcatttttaaattcaaccctaacaaaaacagaaact
aaaagggtgaaaaaagaagtaatgagtggagacttaaaacttctttatgtagcacccgaa
tctttaacgaaagaagaaaacgttgaatttcttaagcaagcaaacatatcatttgctgct
attgatgaggctcactgtatttcagaatggggtcatgatttccgtccagaatacagaaag
attaaatcgatccttcagcagatttctaatattccaataattgcattaactgcaaccgct
actccaaaagtgcaacttgatatacagaagaatcttaatatggaggaggctaatgtattc
aaatcttccttcaacagagaaaatctctattatgaagttcgccctaaaaatcaggcgaaa
aagcagcttataagatttttgaatgaacggaaaggaaaatgtggtgtaatctattgcctt
agtagaaaaaaggttgaagaaattgcagaattcctgaatgttaatggctttaatgcagct
ccatatcatgctggattagaaagtggtgctagaatgaaaaaccaggacgactttctaaat
gaagatgttgacatcattgttgctacaattgcatttggaatgggtatagataaacctgac
gttcgttttgtaattcattatgacactccaaaatcagtagaaggctattatcaagaaacg
ggtagagctggtagagatggcttagtaggtgattgcttaatgttttacagctataacgat
atcttaaagcttgaaaagtttaataaagacaagccagtaacagaaaaagaaaatgcaaaa
ctcttattagaggaaatgtcttcttatgctgaatcatcagtttgtagaagaaaacagtta
cttcattatttcggtgaagaatttggtgattactgtggtaaatgtgataattgcttacat
cctaaagagaaatttgaagctaaggaagaaatgataacagttttaaaaactgtaaaactc
acgaaagaacgtttcggaattaatcatttagtaaatgtaataagaggctcaaatgatcaa
tatgttaccagctacggacacaatgagcttgaagttcatggagtaggctctgataaagat
ctagagttttggaaatctgtaatcagacaaaccatgctttatggataccttgaaaaagac
attgaaaatattggagtccttaaattaaatgatgcaggaaagaaatttttagaagcccct
actgatattcaattcacagttaatcatgtttatacggatgatggagacgaagaccaaata
gaaaaagaaaccgtttcagccaattcatttgatgaaacattattttctcaattaaaagct
ttacggaagaaggttgcaaagtctaaaaatcttcctccatatgtaattttccaagatcca
tctttggaagaaatggctacaacctaccctaccactcaggatgaacttgcagcagtgaat
ggtgtaggtttaggaaaagtcagaaaattcggaaaaccttttatggagcttataaaagag
tatgtggatgaaaatgacattataacagcagcagatgtaatggtgaaatcatctgttaac
aagtcaaaaatgaaaatcttcatcattcagcaggttgataaaaaaatcgaccttgaagaa
attgctgaaatgaaagacatatcctttgaggagttgatagatgaaattgaactaatctgc
tattcaggtacaaccttaaatctggattattacttaaatcaaatcattgatgatgaaaag
caagaagaaattatggattatttcttgtcttcagaatcagacagcatagatgatgcaatg
gatgagtttgaagatgaattcagtgaagaagatttaaggctgatgagaattaagttttta
tcaacttacgcaaactaa
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