Marivirga arenosa: QYS47_20260
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Entry
QYS47_20260 CDS
T10278
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
marp Marivirga arenosa
Pathway
marp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QYS47_20260 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marp03400
]
QYS47_20260 (ruvB)
Enzymes [BR:
marp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QYS47_20260 (ruvB)
DNA repair and recombination proteins [BR:
marp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QYS47_20260 (ruvB)
RecFOR pathway proteins
QYS47_20260 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_3
NB-ARC
TIP49
AAA_16
AAA_14
Mg_chelatase
nSTAND3
NTPase_1
TsaE
Sigma54_activ_2
NPHP3_N
bpMoxR
Torsin
RNA_helicase
Bac_DnaA
AAA_PrkA
MCM
AAA_33
Rad17
AAA_18
ABC_tran
IstB_IS21
NACHT
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WNB17370
UniProt:
A0AA51ZV92
LinkDB
All DBs
Position
complement(3276321..3277349)
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AA seq
342 aa
AA seq
DB search
MREDFLTGDDDNMNSEEKEFEKALRPLSFGDFTGQQKTVDNIQVFVMAAKKRAEPLDHVL
LHGPPGLGKTTLSHIIANELDSNIKITSGPVLDKPGDLAGLLTNLEEGDVLFIDEIHRLN
AVVEEYLYSAMEDFRIDIMLDSGPNARSVQISLSPFTLIGATTRSGLLTSPLRARFGINA
RLEYYDAELLKKIIKRSAAILNTPLEEDAAFEIARRSRGTPRIANTLLRRTRDFAEIKGD
GTITKSIAEIALDALDVDQHGLDEMDNRILTTIIDKFKGGPVGLGTIATAVGEEADTIEE
VYEPFLIQEGYLKRTARGRQATELAYKHIGSVPPGRIGSLFD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagatttcttgactggtgatgatgataatatgaactctgaggaaaaggagttt
gaaaaagctttaagacccctgtcatttggtgattttacaggtcaacaaaagactgtagat
aacattcaggtttttgttatggcagcaaagaaacgggctgaacctttggatcatgttctt
ctacatggccctccaggtttagggaaaaccactttatctcatattattgccaacgaatta
gattcaaatattaaaataacatctggccctgtgttggataagccaggtgatttagcagga
ttgctcactaatcttgaggaaggagatgttttatttattgatgagatccacagattaaat
gctgtagtggaggaatatttatattctgccatggaagatttcagaattgacatcatgcta
gatagtggtcccaatgcaaggtctgttcagatcagcttaagtccttttactttaatagga
gcaactactcgctctggattactaacttcaccattgagagcccgctttggtattaatgcc
aggttggaatattatgatgctgaattattaaagaaaatcataaaacgttcagccgccatt
ttgaacacccctttggaggaagatgcagcctttgaaattgcaagaagaagtagaggaact
cctagaattgcgaatacattattgcgtagaactcgtgattttgcagaaattaaaggagat
gggacgattacgaaatcaatagcagaaattgcattagatgccttggatgtagatcagcac
ggtcttgatgaaatggataatagaattttgaccactattattgataaatttaaaggtggg
ccggttggacttggaaccatcgctacagcagtgggtgaggaagcggatacaattgaagaa
gtatatgagcctttccttattcaagagggttatcttaaaagaactgctagaggtcgacaa
gctactgagttagcctataaacatatcggaagtgttcctcctggaagaattggtagttta
tttgattaa
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