Marivirga arenosa: QYS47_20290
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Entry
QYS47_20290 CDS
T10278
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
marp Marivirga arenosa
Pathway
marp03030
DNA replication
marp03430
Mismatch repair
marp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QYS47_20290 (dnaE)
03430 Mismatch repair
QYS47_20290 (dnaE)
03440 Homologous recombination
QYS47_20290 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marp03032
]
QYS47_20290 (dnaE)
03400 DNA repair and recombination proteins [BR:
marp03400
]
QYS47_20290 (dnaE)
Enzymes [BR:
marp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QYS47_20290 (dnaE)
DNA replication proteins [BR:
marp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QYS47_20290 (dnaE)
DNA repair and recombination proteins [BR:
marp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QYS47_20290 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
MCM10_OB
T2SSK
DUF6282
HHH_3
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
WNB17366
UniProt:
A0AA51ZV86
LinkDB
All DBs
Position
complement(3267721..3272022)
Genome browser
AA seq
1433 aa
AA seq
DB search
MYLIYDTETTGLPKNYNAPLSDADNWPRCVQIAWQLHGAKGELLDAQNHIIIPEGFDIPY
NAEKVHGISTERAHKEGKPLTEVLEAFKAILEKTDVVVGHNIGFDISIMGAEMLRKELSE
TVLTDKPIIDTKDAGTNFCKIPGGRGGQYKWPTLTELHQKLFGKDFADAHDAAYDVDATA
KCFFGLISEKAVQPLGDTPIEAINYEPPKLDAANFASSSKNEEKAAADALKQAKNADISQ
LSETPFVHLHCHTQFSILQSTTEIPSMVNKAKDLGMPAIAMTDHGNMMGAYNFVRDANKA
GIKPIVGCEFFLTQDRKNKKNKDDGFQTVLLAKNKAGYHNLAKLSSIAFVEGFYYVPRID
REALVQYKGDIIATTGGLWGEVPFLILNAGEAQAEEAFVWWKEQFGEDFYIELNQHGIPE
EQKVNEVLLKFAKKYDVKYFAANNTYYTNKEDAEAQDILLCVKDGETTGAQGKPKKYVGK
RGREYRFGLPNDEFYIKSPDEMKKLFADYPEAIACTAEIAEKIEGFELARDVLLPKYDIP
EEFVDPKDAEDGGNRGENAYLKHITFEGARKRYETITPEIEERLNFELETIERTGYPGYF
LIVQDFTTAAREMGVSVGPGRGSAAGSAVAYCIGITNIDPVKYDLLFERFLNPDRVSLPD
IDIDFDDHGRQKVIDYVIDKYGANQVAQITTYGTMAAKSAIRDTARVMELPLMDADRIAK
LVPDIKLKALFDLAPDKKKLSAKLKNNGEAISKAEELLNLAKANDASAKVINQARVLEGS
VRNTGIHACGVIITPDDITKFVPVALAKDSDMYCTQFDNAVVENAGLLKMDFLGLKTLTL
IKDAVRIVEERHGVKLDPDAFPIDDQQTYELFQRGETVGIFQYESPGMQKYLRELKPTEF
SDLIAMNALYRPGPLEYIPNFVNRKNGREEISYDLPEMEEYLKETYGITVYQEQVMLLSQ
KLAGFTKGEADVLRKAMGKKIFALLEELKPKFINQGAEKGHPKDVLEKIWKDWEAFAAYA
FNKSHSTCYAWVAYQTAYLKAHYPAEYMASVLSNNMNQITDVTFFMEECKRAGIEVLGPD
INESNAGFTVNENGQIRFGLAAIKGAGAAAVESIIQERKENGQYKDVFDFAERIPLKSVN
KKTFEALAMAGGFDCFKDYHRKQFLVSDNGEGTLIEKIIKYAQKLQQEKDSAQTSLFGGD
AGVAIPPPKVAEMEPYSELEKLNIEKEVVGLFISGHPLDEFKFEMESFCNTPVSELNDLE
SLAAKNEVKVGGIVTAVAHRQTKTGKPFGTLQLEDYGGSFTFFLFGDDYLGNKQFLENGW
FIFISGRVARKKWGDQGLEFKISNIELLSELRDKRTKSLSISLDLNAITEDLIVELDNLC
QTFKGECEVKLELLDKTNGYRVETKSRKYKVNPSNELLEGLGRIPDLNYRILT
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatttacgataccgagaccacaggacttcccaaaaattataatgctccattg
agtgatgcagataattggccaagatgtgtgcaaattgcctggcaattacatggcgcaaag
ggtgagttattagatgctcaaaatcatatcattattccagagggtttcgatattccatac
aatgctgagaaggttcatggaatctcaaccgaaagagcacataaagagggtaagccacta
actgaagtactggaagcctttaaagccatattagaaaagacagatgttgtagtaggtcat
aatataggctttgatatttcaattatgggagcagagatgcttcgcaaagaactatcggaa
actgtattaacggataagccgataatcgataccaaagatgcaggtacaaatttctgtaaa
atacctggtgggagaggaggacaatacaaatggcctacattaacagagcttcaccaaaag
ctatttggaaaagattttgctgatgcgcatgatgctgcatatgatgttgatgctactgca
aaatgtttctttggcttaatttctgaaaaagcggttcaaccattaggcgatacccctatt
gaagctattaattatgagccacctaaattagatgctgcaaattttgcttcaagctcgaaa
aatgaagaaaaggcagcagctgatgctttaaagcaagctaaaaatgcagatatctcacaa
ttaagcgaaacgccttttgtacacctgcattgtcatactcagttttctattttgcagtct
actacagaaatcccttcaatggtaaataaagcaaaagatttagggatgcctgcaatagcc
atgacagatcatggtaacatgatgggagcttataattttgtacgagatgctaataaggct
ggaattaaacccattgtgggctgtgaatttttcttaacgcaggatagaaaaaataaaaaa
aataaggatgatggcttccaaaccgttttgttagctaagaataaggcaggttatcataat
ctggctaaattatcctctatcgcttttgtagaaggcttctactacgttccaagaattgat
agagaagctttagttcaatacaaaggagatattattgctactacaggtggattgtggggt
gaggttccttttttaattctgaatgcaggtgaggcacaagctgaagaggcttttgtatgg
tggaaagaacaatttggagaggatttttacattgaattaaaccaacatggtatccctgaa
gagcaaaaagtaaatgaagttttattgaagtttgctaagaaatatgatgttaaatatttt
gctgctaataatacgtattacaccaataaggaagatgcggaagcgcaggatattttactt
tgtgtaaaggatggagaaactacaggtgctcaagggaaacctaaaaaatatgtaggcaaa
agaggaagagaatatcgttttggtttacccaatgatgaattctacatcaagtcacctgat
gaaatgaaaaagctttttgctgattatcctgaagcaattgcttgtactgctgagatagct
gagaaaattgaaggattcgagttagcaagagatgtacttcttcctaaatatgatattcca
gaagaatttgttgatcctaaagatgctgaggatggtggaaatagaggtgaaaatgcctat
ttaaaacatattacgtttgaaggtgccagaaagagatatgaaaccattactcctgaaatt
gaagaaaggctcaactttgagctagaaacaatagaaagaacgggatatcctggttatttc
ttgattgtacaggatttcactacagccgctcgcgaaatgggagtatcagttgggccgggt
agggggtcagctgctggttcagcagtagcctattgtatcggaattacgaatatcgatcca
gttaaatacgatttactatttgagcgtttcttaaatccagacagggtttcattacccgat
attgatattgactttgatgatcatggtagacaaaaagttatcgattatgtaattgataaa
tatggagccaatcaagtagcccaaatcaccacttatggtaccatggcagctaaatctgca
attcgtgatactgccagagtcatggaattaccattgatggatgctgatagaattgcgaag
ctggtgccagatataaaattaaaagcactttttgatttagcgcctgataaaaagaaactt
tcagcaaagcttaagaataatggtgaggccatcagcaaagcagaagaattattaaatctt
gctaaagctaatgatgcttccgctaaggtgattaatcaagctagagtattagaaggttct
gttcgtaatacaggaatacatgcttgcggtgtaattattacaccagatgatattacaaaa
tttgttcctgtagctttagccaaggattctgacatgtattgcacccagtttgataatgct
gtggtggaaaatgctggtttactaaaaatggatttcttgggtttaaaaaccctaactcta
ataaaggatgcagtcaggattgtagaagaaagacatggggttaaactagaccctgatgcc
tttccaatagatgatcagcaaacctatgagctattccagcgaggagaaacggttggtatt
ttccaatatgaatctcctggtatgcagaaatatttacgagaattaaaaccaacagagttc
tcggatttgattgcgatgaatgccctttatcgtcctggtccattagaatacattcctaat
ttcgttaatcgtaaaaatggtcgagaggagatcagctatgaccttcctgaaatggaagaa
tatctgaaggagacctatggtattacggtttatcaggagcaggtgatgttgctttctcaa
aagcttgcaggttttaccaaaggtgaagcggatgttttgcgtaaagcaatgggtaaaaag
atatttgctttactagaagaattaaagcctaaattcattaatcagggtgcagaaaaaggt
catccaaaagatgttttagaaaaaatctggaaagactgggaagcatttgcagcatatgca
tttaataaatctcattcaacttgctatgcttgggtagcttaccaaacggcttatttaaaa
gctcactatccagcagaatacatggcatcagtactgagtaataatatgaaccagatcact
gatgttactttctttatggaagaatgtaagcgagccggtattgaagttttaggtcctgat
attaatgaatcaaatgcagggtttacagtaaatgaaaatggtcagattcgttttggttta
gctgcaattaagggagcaggtgctgcagctgttgaaagtataatccaagagcgaaaagaa
aatggtcagtacaaggatgtttttgattttgcagaaagaatacctttaaaaagcgtgaat
aaaaagacttttgaagccttagctatggcaggaggctttgattgctttaaagattatcac
agaaaacaattcttagtatctgataatggtgaaggaacactcattgaaaaaataattaaa
tatgctcaaaagcttcagcaagagaaagacagcgctcagacatcactttttggtggagat
gcaggtgttgccattccgccaccgaaagtggctgagatggagccttattctgagctagaa
aaactaaatattgagaaagaagtagtagggctcttcatttccggtcatccgttggatgag
tttaaatttgagatggaaagtttctgcaatactccagtttcagagttaaatgatttagaa
agtcttgctgccaaaaatgaagtgaaagtagggggaatagtaactgccgttgctcatagg
caaaccaaaactggtaaaccttttggtaccctacaactagaagattacggtggatcgttt
acctttttcctttttggagatgattatttaggcaataagcaattcttagaaaatggttgg
tttatctttatttcaggaagagtagctcgtaaaaagtggggagatcaaggcttagaattc
aagattagtaatatcgaactcctgtcggaattaagagataaacgtactaaaagtttatcg
atcagtttagatctgaatgctattactgaagatttaattgtagaattagataacttatgc
caaacctttaagggcgaatgtgaagtaaaattagaattacttgataaaacaaatggctac
agagttgaaaccaaatctagaaaatataaggtgaaccctagtaatgagttattagaaggt
ttaggaagaattccagatttgaattatagaattttgacataa
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