Marivirga arenosa: QYS47_27880
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Entry
QYS47_27880 CDS
T10278
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
marp Marivirga arenosa
Pathway
marp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
marp00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QYS47_27880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marp03021
]
QYS47_27880
Transcription machinery [BR:
marp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QYS47_27880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
WNB16842
UniProt:
A0AA51ZV03
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All DBs
Position
2188848..2189711
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AA seq
287 aa
AA seq
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MRQLKISKQITNRESQSLDKYLQEIGKVDLLTPDEEVDLAVRIKQGDQLALEKLTKANLR
FVVSVAKQYQNQGLSLGDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNRVGSLNKISKTFSTLEQKFEREPSPDELAEVLEVTSNEVVDTMKISGRHV
SMDAPFVQGEENSLLDVLENDGEESPDDELMNDSLRREVQRALSTLTQREADVITLYFGL
NGEHSMTLEEIGEKFSLTRERVRQIKEKAIRRLRHTSRSKALKPYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacagctcaagattagcaagcaaatcaccaatcgggagagtcaatccctcgataaa
tacttacaagaaatagggaaagtagatttgttaactccggacgaggaagtagatttagcc
gttaggattaaacaaggtgatcaacttgcacttgaaaaattgactaaagccaatttgcgt
ttcgtagtgtctgtggccaaacaatatcagaatcaaggtttatccttaggagacttgatt
aatgaaggaaacttaggtttgatcaaggcagctcaaaggtttgacgaaaccagaggtttt
aaattcatttcttatgcagtatggtggatcagacagtccatattgcaagcattggcggag
caatctcgtattgttcgtcttccattgaatagagtaggatctttaaataagatttcaaaa
accttctctaccttggagcaaaagtttgaaagagagccatctccggatgagcttgctgaa
gttttagaggttacttcaaatgaagtagttgatactatgaaaatctctggtcgtcacgta
tctatggatgcaccttttgtacaaggtgaggaaaatagtcttctagacgtattagaaaat
gacggtgaagaatctcctgatgatgaattaatgaatgattcattgagaagagaggtacag
agagctttatctactttaactcaaagagaggctgacgttatcactttgtactttggattg
aatggtgagcattcgatgactcttgaagagattggagagaaatttagtttaactagagaa
agagttcgtcagattaaagaaaaagcaattagacgacttagacatacatcaagaagtaaa
gcattaaaaccttatttgggttag
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