Marivirga arenosa: QYS47_33100
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Entry
QYS47_33100 CDS
T10278
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
marp Marivirga arenosa
Pathway
marp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QYS47_33100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marp03019
]
QYS47_33100
03009 Ribosome biogenesis [BR:
marp03009
]
QYS47_33100
Enzymes [BR:
marp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QYS47_33100
Messenger RNA biogenesis [BR:
marp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QYS47_33100
Ribosome biogenesis [BR:
marp03009
]
Prokaryotic type
rRNA helicases
QYS47_33100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
RecG_N
Topoisom_I_N
SBF_like
Motif
Other DBs
NCBI-ProteinID:
WNB17154
UniProt:
A0AA51X426
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All DBs
Position
2850939..2852684
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AA seq
581 aa
AA seq
DB search
MLTFEELGLKPEILKAILEIGFETPTAIQQKTIPHLLNSKQDLIALAQTGSGKTAAFGLP
VINQIDSNSKKTQSLVLCPTRELAIQIANDFNAYTKFSNRLDVLPVYGGASIETQIKALN
RGAQIVVGTPGRVVDLIKRNKLKLEDIEWVVLDEADEMLNMGFKDDLDFILSHTPESRQT
LLFSATMSKEVLRISNNYMSNPEEISSGKRNQGADKVDHFYYVVKAKDKYLALKRIADIN
PNIYGIIFCRTKRETQEISDQLVADGYNADCLHGDLSQAQRDAVMGRYRKKHLQMLVATD
VAARGLDVNEITHVINYNIPDDLETYTHRSGRTGRAGKAGISMAIIGPRDVNKIKQLEKV
LGKSFTKADVPAAEAVIEKQLMSFVNKVKSTEVDEKQMEPFIENIAAEFEELSREELIKK
FVSVEFNKFLDYYKNSSDINQTASAGRDNERGDSRRKNGNFNKLFLNIGQKDNLNAGTLL
GWINGLQNVPNGIEFGKIDVQRSFTFMEVESQHEDTILGALNGSEFDGRKVVAEPKTGGG
PRSSGRSDGKRKNSSGFKKRAGDRKPGGRSRVKAGSGGRRR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgctaacattcgaagaattaggccttaagcctgaaattctcaaagctattttagaaata
ggttttgagacaccaactgctattcagcaaaaaactatccctcatttattaaactctaag
caagatttaattgctttagcacaaacagggtctggtaaaacagccgcttttggattacct
gtaattaatcaaatcgacagtaattctaaaaagactcaatctttagtattatgtcctact
agagaattagctattcaaatcgctaatgattttaatgcatatacaaaattctctaataga
ttagatgttttaccagtttatggtggagcaagcattgaaactcaaattaaagccttaaac
agaggcgctcaaatagtggtcggaacacctggtagagttgttgatttaatcaaaagaaat
aaactaaagctagaagacattgagtgggtagtgttggatgaagctgatgagatgttgaac
atgggatttaaagatgatcttgatttcattctttctcacactcctgaaagcagacaaacc
ttattattttctgctacaatgtcaaaagaggtattaaggatttcaaataattatatgtct
aatcctgaagaaatatcttctggaaaaagaaatcaaggggctgataaagtcgaccatttc
tattatgtagtaaaagcaaaagataaataccttgctttaaaaagaattgcagatataaac
ccaaatatttatgggatcatcttttgtagaaccaaaagagaaacccaagagatctctgat
caattagtagccgatggctataatgctgattgtttacatggtgatttatctcaagctcag
cgtgatgctgtgatgggacgttatagaaaaaaacatcttcaaatgcttgttgctactgat
gtagctgctcgtggcttagatgtaaatgaaattacccatgttatcaattacaatattcct
gatgatcttgaaacttacacacacagaagtggaagaacaggaagagcaggtaaagctggt
atttcgatggccattataggtcctcgtgatgtcaataaaattaagcaacttgaaaaggta
ttaggtaaatcatttacaaaagctgacgttcctgctgctgaagcggtaattgaaaagcaa
ttgatgtcatttgtgaataaggttaaatcaacagaagttgatgaaaagcaaatggagcca
ttcattgaaaatattgctgctgaatttgaagaattaagtagagaagaattaattaagaaa
ttcgtttcggtggaattcaataagttcttagattattataaaaactcatctgatattaat
caaactgcttcagcaggaagagataacgaaagaggagatagcagaagaaagaatggtaac
ttcaataagctattcttaaatatcggtcaaaaagataatctaaatgccggtacgcttcta
ggatggatcaacggcttacaaaacgttccaaatggaatcgaatttggtaaaattgacgtt
caaagaagctttacttttatggaagttgaaagccaacatgaggacacaattttaggcgct
ttaaatggcagcgaatttgacggcagaaaagtagtcgctgagccaaaaacaggtggtggt
ccaagaagttcaggacgttctgatggaaagagaaaaaacagtagtggtttcaaaaaaaga
gctggagatagaaaaccaggtggacgctcaagagtaaaagcgggctctggtggtagaaga
agatag
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