Marinagarivorans cellulosilyticus: MARGE09_P0356
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Entry
MARGE09_P0356 CDS
T07868
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
marq
Marinagarivorans cellulosilyticus
Pathway
marq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
marq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MARGE09_P0356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marq03021
]
MARGE09_P0356
03400 DNA repair and recombination proteins [BR:
marq03400
]
MARGE09_P0356
Enzymes [BR:
marq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MARGE09_P0356
Transcription machinery [BR:
marq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MARGE09_P0356
DNA repair and recombination proteins [BR:
marq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MARGE09_P0356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
BCD96157
UniProt:
A0AAN1WEL6
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All DBs
Position
476900..477889
Genome browser
AA seq
329 aa
AA seq
DB search
MQTAVNEFLTPRHIDVTEVSPNRAKVVLEPLERGFGHTLGNALRRILLSSMPGCAITEVE
IEGVQHEYSAVEGVQEDVIEILLNLKNVALTLEGKDSVTLSLSKKGPGVVTAGDIQVDQS
VEIKNPDLVIANITGDVSLNMQLIVARGRGYQPADARVVDEEENRTIGRLQLDASYSPVR
RLAYSVESARVEQRTDLDKLVLDLETNGTLDPEEAIRRAATILQQQLAVFVDLEGEKEAE
PEKKEDQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASLRTGD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagacagctgtgaatgaatttttgaccccgcgtcacattgacgtcaccgaagtatct
cctaatcgagctaaggtagttttggagccgcttgagcgaggttttggtcatactttaggt
aacgcattgcgtcgtatcttgctgtcttcaatgccgggttgcgcaattactgaagtggaa
attgaaggcgttcagcacgaatacagtgcagttgagggagtgcaagaagatgtgattgaa
atcttgcttaacctcaagaacgtcgcattgacactggaaggtaaagatagcgttacttta
agcttatctaaaaaaggtcctggcgttgtaaccgctggtgatattcaagttgatcagagt
gttgagattaaaaaccctgatctagtcattgccaatattactggagatgttagcttgaat
atgcagttgatcgttgctcgtggtcgtggttatcagcctgctgatgcccgcgttgttgac
gaagaagaaaaccgtactattggtcgtcttcaattggatgcatcttacagccccgttcgc
cgtttggcttactcggttgagagtgctcgtgttgagcagcgtacagacctagataagttg
gtattggatctggagactaatggtaccttagatccagaagaagctattcgtcgtgctgcc
actatccttcagcaacagttagcggtattcgttgaccttgaaggtgaaaaagaagctgag
ccagagaagaaggaagatcaaattgatcctgttcttcttcgcccagtagatgatcttgag
cttactgttcgttctgcgaactgcttgaaagctgagaacatttactacattggtgatttg
attcaacgtacagaagttgagttgttgaaaacgccaaacttgggtaaaaaatctcttact
gagattaaagatgtgctcgcatctcgtggcttgtcattaggtatgcgcttagaaaactgg
ccaccagccagcttgcgtaccggcgactaa
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