Marinagarivorans cellulosilyticus: MARGE09_P0641
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Entry
MARGE09_P0641 CDS
T07868
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
marq
Marinagarivorans cellulosilyticus
Pathway
marq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
marq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MARGE09_P0641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marq03400
]
MARGE09_P0641
Enzymes [BR:
marq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MARGE09_P0641
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MARGE09_P0641
DNA repair and recombination proteins [BR:
marq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MARGE09_P0641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_IS1595
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
BCD96441
UniProt:
A0AAN1WF43
LinkDB
All DBs
Position
865407..866228
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AA seq
273 aa
AA seq
DB search
MPELPEVETTCRGIRPHVKGRVVTDVVVRNGRLRWPVDTQLASIISGSTLREVSRRAKYV
MLTFDAGVLLVHLGMSGSLRVIEPGAAIGKHDHIDVVFGRALALRFNDPRRFGAFVWHGD
AATIDAHALLAHLGPEPLSEDFSGDYLYTQARNKKTPLKSFIMDAKVVVGVGNIYANEAL
FAAGLHPLKDAGKLTRPKAARLVAEIKTVLAHAIERGGTTLRDFVGGDGKPGYFAQELNV
YGHGGKPCPRCAKALTEKRLQNRTTVYCSNCQK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctgccagaagtagagacaacctgccgaggaattcgcccgcatgtaaagggg
cgcgtggtaaccgatgttgtggtgcgtaatggtcgcttgcgttggcctgttgatacccaa
ttggcgagcattatcagcggtagcaccctgcgcgaggtatcgcggcgggcaaagtatgtg
atgttaaccttcgatgcgggcgtgttattggttcatttgggtatgtcgggtagcttgcgc
gttatagagcctggcgccgctattggtaagcacgatcatatagatgtggtttttggtcgc
gctttggcgctgcgctttaatgaccctcgacgttttggcgcttttgtatggcatggagat
gctgcaacaattgatgcgcacgccttgttggcgcacttgggtccagagccgctatcggaa
gatttctcgggggattacctttacacccaagcgcgcaataaaaaaacgccgctaaagagc
tttattatggatgccaaggtggttgtaggcgtaggtaacatttatgcgaacgaagcgcta
tttgctgcaggtttgcacccgcttaaagatgccggcaagctaactcggcctaaagcggca
cgcttggtcgccgagattaaaacagtattggctcatgctattgagcgcggaggcacaaca
ttgcgcgactttgttggcggcgacggcaagcccggttacttcgcacaagaattaaacgtc
tacggccacggcggtaaaccttgcccgcgctgcgccaaggcgctaaccgaaaaacgcctg
cagaatcgtacaacggtttattgcagcaactgccagaagtaa
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