Marinagarivorans cellulosilyticus: MARGE09_P0975
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Entry
MARGE09_P0975 CDS
T07868
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
marq
Marinagarivorans cellulosilyticus
Brite
KEGG Orthology (KO) [BR:
marq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
marq03016
]
MARGE09_P0975
Enzymes [BR:
marq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MARGE09_P0975
Transfer RNA biogenesis [BR:
marq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MARGE09_P0975
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
BCD96775
UniProt:
A0AAN1WFR3
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All DBs
Position
1262536..1263675
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AA seq
379 aa
AA seq
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MDDVPVSPGSLLRQSIIFINDDETLANYCSTWLQCRLLAVDTEFMRVDTYYPIAALIQVN
DGNANYLIDPLDITDWQPLASVLASDDVIKAFHACSEDLDVFNTLLGVLPNKLFDTQAAA
ALLGIGASVGYANLVNECLQVELPKGETRSNWLARPLSDAQNLYAALDVDYLFELTVLLE
QRLAAKERQAWVYEESQAIIDNYIANADPSSGFYKSNNTWRLNAQDLIVAKQLFDWREIT
ARERNIPRTRILKDAQLFEVIQRKPNALAQLKALGFHDSAIRKFGKAILSLLDPAENSSA
VELKASQKPLTKAQRERVKGLKETVNSIAEQYGIAPEILARKADYQMVARTTPADSRDVD
ALLTCLQGWRKQFFESISL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgtacctgtaagtcctggctcattattgcgccagagcattatttttattaat
gatgatgaaaccttagccaattattgcagcacttggttgcaatgccgtttgttggccgtt
gataccgagtttatgcgggttgatacctattacccaatcgcggcgttaattcaggttaat
gatggcaatgccaactatctgatcgaccctttggatattaccgattggcaacctttggct
agtgttttagcttctgatgacgttattaaagcttttcacgcctgctcagaagacctcgat
gtttttaatacgctacttggtgtattacccaataaattgtttgatacccaagctgcagcg
gctttgctaggtattggtgctagcgtaggttatgcaaatttagtcaatgagtgtttacag
gtagaactgccaaaaggcgaaacgcgatccaattggctagctaggccattaagtgatgcg
caaaatttatacgcggcactggatgtagattatttatttgaactcaccgtgctgcttgag
cagcgcttggcggctaaagagcggcaagcatgggtgtatgaagaaagccaagcgattatt
gataattatattgcgaatgcagacccgtctagtgggttctataaatccaataatacatgg
cgcttgaacgcacaagaccttatcgtggcaaagcagctattcgattggcgcgaaattacc
gcgcgagagcgcaatataccgcgtacccgcattttaaaggatgctcagctctttgaagtt
attcaacgaaaaccgaatgcgcttgctcagttaaaagctttgggttttcacgatagtgcc
attcgaaagtttggcaaagccattttgagcttacttgaccctgccgaaaattcatcggct
gttgaattaaaagcttcgcaaaaaccactgactaaggctcagcgcgagcgcgtaaaaggg
ttaaaggaaactgtaaattctattgccgagcaatatggtatcgcacctgaaattcttgcc
cgtaaagcggattatcaaatggtggcaagaactactccggctgatagccgagatgtggat
gccttgctcacttgcctgcaagggtggcgaaaacaattctttgaaagtatatctctatga
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