Marinagarivorans cellulosilyticus: MARGE09_P1585
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Entry
MARGE09_P1585 CDS
T07868
Name
(GenBank) RNA polymerase primary sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
marq
Marinagarivorans cellulosilyticus
Pathway
marq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
marq00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MARGE09_P1585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marq03021
]
MARGE09_P1585
Transcription machinery [BR:
marq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MARGE09_P1585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DnaD_N
Motif
Other DBs
NCBI-ProteinID:
BCD97384
UniProt:
A0AAN2BJX2
LinkDB
All DBs
Position
complement(2111001..2112827)
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AA seq
608 aa
AA seq
DB search
MSENKQSRIKDLINRGREQGYLTYDEVNDHLPEDISDPDQVEDIIQMINDMGIRVFETAP
DADELLMNDSDNPDEIAAAEAAAALAAVETEAGRTTDPVRMYMREMGTVELLTREGEIAI
AKRIEEGIRELMHALAFWPGSVKTILDEFTLCEAGERRLTDVISGWLDPAEDPEAPKTEG
FQEKKEDAKKDDGDDADDDDDEADTGIDPEYARERFNELRDASLAAEEAIIAKGRMSKEA
GKALEELGGVFRFFKLPPRQFDPVYGSAREVLQKVRQTERELMMQCIRYGKMPRKTFIKE
FPGNETNLDWIPSIVKKKRDYSDSMRNVADNILKLQEALLEIEQATGLELSTIKEINRRM
SLGEARARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGY
KFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAE
RMEMPEDKVRKVLKIAKEPISMETPIGDDEDSHLGDFIEDVSITSPVESATTQGLMESTR
EVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPTRSD
HLRSFLDE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaacaaacagtcgcgaatcaaagacttaatcaatcgcggtcgcgagcaaggc
tacctgacctacgatgaagttaatgatcacctccccgaagacatctccgatccagatcag
gtcgaagatatcatccagatgattaacgacatgggcatccgcgtattcgaaaccgcgccc
gatgccgatgagctgttgatgaacgacagcgacaaccccgatgaaattgccgctgcagaa
gctgctgctgcgctagctgcagtagaaaccgaagctggccgcaccacagaccctgtgcgc
atgtatatgcgcgaaatgggcaccgtggagctactgacccgcgaaggcgaaatcgccatt
gccaagcgcattgaagaaggtattcgcgagctaatgcacgcgctagcattttggcctggc
tcagtaaaaacgattcttgatgaattcacactttgcgaagctggcgagcgccgcttaaca
gacgttatcagcggctggctagaccccgccgaagacccagaagcccccaaaacagaaggc
ttccaagaaaagaaagaagacgccaaaaaagatgatggcgacgatgctgatgacgatgac
gatgaagccgataccggcatcgacccagaatatgcccgcgaacgctttaacgaactaaga
gacgcatccttagctgctgaagaagccatcatcgccaaaggccgcatgagcaaagaagcg
ggcaaagcactcgaagagcttggcggcgttttccgcttcttcaaactgccaccgcgccag
ttcgaccccgtttacggcagcgcccgcgaggtactacaaaaagttcgccaaaccgagcgc
gaactgatgatgcagtgtattcgctacggcaaaatgccacgcaaaacctttatcaaagaa
ttccccggcaacgaaaccaaccttgactggatcccttccatcgttaagaaaaagcgcgac
tactccgatagcatgcgcaacgtggccgacaacattttaaagctgcaagaagccctgctg
gaaatagaacaagccaccggcttagagcttagcaccattaaagaaatcaaccgccgcatg
tcgctcggcgaagcccgtgcccgccgcgccaaaaaggaaatggttgaagccaacctacgc
cttgtaatttctatcgccaaaaagtacaccaaccgcggcttacaattcctcgaccttatt
caagaaggcaacatcggcttgatgaaagccgtcgataaattcgaataccgtcgcggctac
aagttttcgacctatgcaacatggtggattcgccaggcaattacccgctctattgccgac
caagcgcgcaccattcgtattccggtccacatgattgagaccattaacaaactcaatcgc
atcagccgtcaaatgcttcaagaaatgggccgcgaacccacaccagaagaacttgccgag
cgcatggaaatgcccgaagacaaagtgcgcaaagtgcttaaaatcgccaaagaacccatc
tcgatggaaaccccaatcggcgacgatgaagattcgcacttgggcgactttatcgaggac
gtgtcgataacgtcaccggtagaatcagccaccacccaaggcctgatggaatctacccgc
gaagtactagccggccttaccgctcgcgaagccaaagtactgcgcatgcgcttcggcatc
gacatgaacaccgaccacacgttggaagaagtgggtaaacagttcgacgtaacgcgcgag
cgcattcgtcagattgaggcgaaagcactgcgcaaactgcgccaccccacccgctcagac
cacctacgaagctttttggacgaataa
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