Marinagarivorans cellulosilyticus: MARGE09_P1719
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Entry
MARGE09_P1719 CDS
T07868
Name
(GenBank) tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase)
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
marq
Marinagarivorans cellulosilyticus
Brite
KEGG Orthology (KO) [BR:
marq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
marq03016
]
MARGE09_P1719
Enzymes [BR:
marq01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MARGE09_P1719
Transfer RNA biogenesis [BR:
marq03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MARGE09_P1719
Prokaryotic type
tRNA splicing ligases
MARGE09_P1719
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
ACP_PD
Motif
Other DBs
NCBI-ProteinID:
BCD97518
UniProt:
A0AAN2BJZ0
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All DBs
Position
complement(2274007..2275215)
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AA seq
402 aa
AA seq
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MPVFIEFNKANSKGDVPIKVYTHAIDPKAITQLKNTATLPIVGPHVAAMPDVHLGVGATV
GSVIPTRNAIIPAAVGVDIGCGMNAIQLSLRSTQLPDNLALMRSAIERAIPVGLSAHKRI
SARDAACNPLAASLEKITKAHPDIKKRLKKADTLWVTQMATLGSGNHFIEVCIDEAGYVW
LMLHSGSRGMGNAIGSYFIERARKQIENRARKLIDKNLAWFDEAQTDFHDYMAAVNWAQE
YARINRQEMMKLTLRAIEPFLPKFTITHEAINCHHNYVEQEQHFGETLYITRKGAINAKR
GQLGIIPGSMGDKSFIVRGLGNADSFCSCSHGAGRVMSRSAARQRFTREDLATQTRGVEC
RKDSRVIDEIPAAYKNIDDVMNNQSDLVDIVHTLKQVICIKG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttttcatagaatttaataaagccaatagcaaaggcgatgtacccattaaggta
tatacccacgctattgaccctaaagcaattacacaactaaaaaataccgcgacattaccc
attgtgggccctcatgtagccgctatgcccgatgtgcatctgggtgtaggcgcaacggtg
ggttcggttattccaacacgcaacgcaattattccggctgccgttggcgtggatattggt
tgcggtatgaatgctattcagctatcgctacgtagcacgcaattgccagataacctagcc
cttatgcgcagcgctattgagcgtgcaatacctgtaggcttatcagcacataaacgcatt
agtgcacgcgatgcagcctgtaatccactcgccgcatcgctagagaaaataaccaaagcg
catccagacatcaaaaaacgccttaaaaaagccgatacgctatgggttacgcaaatggca
acactcggcagtggcaaccattttattgaggtgtgtattgatgaggccggttacgtttgg
ttaatgctacattctggcagccgcggcatgggtaacgccattggtagttattttatcgag
cgcgcccgaaagcaaattgaaaatcgagcgcgtaaacttatcgataaaaacctcgcatgg
tttgatgaggcgcaaaccgattttcacgactatatggctgccgttaattgggcgcaagaa
tatgcgcgcattaaccgacaagaaatgatgaagcttacactgcgcgcaatagaacctttt
ttgcctaagttcaccattacgcatgaggcgattaactgccatcataattatgttgaacaa
gagcaacactttggcgaaacactctacattactcgcaaaggcgctattaatgctaagcga
gggcagctagggattattcccggtagcatgggcgataaatcatttattgtgcgcggctta
ggcaacgctgattctttttgctcctgctcccacggggcaggccgcgtaatgagccgaagc
gctgcacggcagcgctttacccgcgaggatttagcgacacaaacacgcggcgtagagtgc
cgaaaagacagccgtgtgatcgacgaaattccagcggcttataaaaacattgacgatgtc
atgaataaccaaagcgacttggtagacattgttcatacacttaaacaagtaatttgcatt
aaggggtaa
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